RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 EBF1Q9UH73 591 aa10.57□□□□□ -0.72
COL4A5-204ENST00000477429 DNM3Q9UQ16 869 aa10.57□□□□□ -0.72
COL4A5-204ENST00000477429 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
COL4A5-204ENST00000477429 OBSL1O75147 1896 aa10.57□□□□□ -0.72
COL4A5-204ENST00000477429 GON4LQ3T8J9 2241 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 K7EQS6 105 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 APBB3O95704 486 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 CDC25CP30307 473 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 GBP1P32455 592 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 DGKEP52429 567 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 SLC12A3P55017 1021 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 SEC13P55735 322 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 TRIM29Q14134 588 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 PDIA5Q14554 519 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL4A5-204ENST00000477429 DDR2Q16832 855 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 UAP1L1Q3KQV9 507 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 ARMCX5Q6P1M9 558 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 ITIH5Q86UX2 942 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 CCDC83Q8IWF9 413 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 CCDC33Q8N5R6 958 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 TTC16Q8NEE8 873 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 ZSWIM2Q8NEG5 633 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 MDGA1Q8NFP4 955 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 DRC1Q96MC2 740 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 FIZ1Q96SL8 496 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 PI4K2AQ9BTU6 479 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 FOXP1Q9H334 677 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-204ENST00000477429 ECT2Q9H8V3 914 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 THG1LQ9NWX6 298 aaKnown RBP10.56□□□□□ -0.72
COL4A5-204ENST00000477429 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-204ENST00000477429 HSFX1Q9UBD0 423 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 MBD1Q9UIS9 605 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-204ENST00000477429 CPSF3Q9UKF6 684 aaKnown RBP10.56□□□□□ -0.72
COL4A5-204ENST00000477429 RAI2Q9Y5P3 530 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 NUP205Q92621 2012 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 DENND4CQ5VZ89 1909 aa10.56□□□□□ -0.72
COL4A5-204ENST00000477429 PTPRDP23468 1912 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 A0A0B4J269 797 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 CYB561D2O14569 222 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 SCAMP3O14828 347 aaKnown RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ATG13O75143 517 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 RHOBTB1O94844 696 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 FGF19O95750 216 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ODC1P11926 461 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 CSRP1P21291 193 aaKnown RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 OPRD1P41143 372 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 PTGER3P43115 390 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 MATR3P43243 847 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 TUFMP49411 452 aaKnown RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ACOT2P49753 483 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 PPP2R3AQ06190 1150 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 STRN3Q13033 797 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 PSMD2Q13200 908 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 MTF1Q14872 753 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ZRSR1Q15695 479 aaKnown RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ZNF77Q15935 545 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 EML3Q32P44 896 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 C2orf27AQ580R0 203 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ANO7Q6IWH7 933 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ARMCX6Q7L4S7 300 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 MON1AQ86VX9 555 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 RASSF3Q86WH2 238 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 EFCAB13Q8IY85 973 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 SYT2Q8N9I0 419 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 FBXO18Q8NFZ0 1043 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 OR2I1PQ8NGU4 316 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 SPATA18Q8TC71 538 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 USP33Q8TEY7 942 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 CD101Q93033 1021 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 C8orf76Q96K31 380 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 FNBP1Q96RU3 617 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 PKMYT1Q99640 499 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 PYM1Q9BRP8 204 aaKnown RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 OXCT2Q9BYC2 517 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 TMEM9BQ9NQ34 198 aa10.55□□□□□ -0.72
COL4A5-204ENST00000477429 MAGED2Q9UNF1 606 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 ATXN2Q99700 1313 aaKnown RBP10.55□□□□□ -0.72
COL4A5-204ENST00000477429 KHNYNO15037 678 aaKnown RBP10.54□□□□□ -0.72
COL4A5-204ENST00000477429 OGTO15294 1046 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 PIGRP01833 764 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 CEACAM1P13688 526 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 DRD1P21728 446 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 ACAT1P24752 427 aaKnown RBP10.54□□□□□ -0.72
COL4A5-204ENST00000477429 CYP2F1P24903 491 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 AVPR1AP37288 418 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 MAPK8P45983 427 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 SLC6A11P48066 632 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 NEK4P51957 841 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 BFSP1Q12934 665 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 USP4Q13107 963 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 ORC2Q13416 577 aaPredicted RBP10.54□□□□□ -0.72
COL4A5-204ENST00000477429 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 ELF2Q15723 593 aa10.54□□□□□ -0.72
COL4A5-204ENST00000477429 EMC10Q5UCC4 262 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms