RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ACBD6Q9BR61 282 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 CHRDQ9H2X0 955 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 TASP1Q9H6P5 420 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 IL21Q9HBE4 155 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 DMAC2Q9NW81 257 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
COL1A1-205ENST00000476387 MAPK8IP1Q9UQF2 711 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 FRMD4BQ9Y2L6 1034 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 PCDHB5Q9Y5E4 795 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 DPYSL4O14531 572 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
COL1A1-205ENST00000476387 PHACTR2O75167 634 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 SMC2O95347 1197 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 LHX1P48742 406 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 CSTF1Q05048 431 aaKnown RBP17.34■□□□□ 0.37
COL1A1-205ENST00000476387 BIRC3Q13489 604 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 TRPC3Q13507 836 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 TAF12Q16514 161 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 ENGASEQ8NFI3 743 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 CSGALNACT1Q8TDX6 532 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 TMEM174Q8WUU8 243 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 NELL1Q92832 810 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-205ENST00000476387 C8orf33Q9H7E9 229 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-205ENST00000476387 ABCB6Q9NP58 842 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 ZSCAN32Q9NX65 697 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 ABI2Q9NYB9 513 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-205ENST00000476387 NDRG2Q9UN36 371 aaKnown RBP17.34■□□□□ 0.37
COL1A1-205ENST00000476387 TRAF3IP3Q9Y228 551 aa17.34■□□□□ 0.37
COL1A1-205ENST00000476387 PTPRDP23468 1912 aa17.33■□□□□ 0.37
COL1A1-205ENST00000476387 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.37
COL1A1-205ENST00000476387 TICRRQ7Z2Z1 1910 aa17.33■□□□□ 0.37
COL1A1-205ENST00000476387 NUP210Q8TEM1 1887 aaPredicted RBP17.33■□□□□ 0.37
COL1A1-205ENST00000476387 FRYLO94915 3013 aa17.33■□□□□ 0.37
COL1A1-205ENST00000476387 NR2F2P24468 414 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 PCSK1P29120 753 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 CASP4P49662 377 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 AP3M2P53677 418 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 TNNC1P63316 161 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 MTAPQ13126 283 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 ARHGAP29Q52LW3 1261 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 SCARA3Q6AZY7 606 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 DPH6Q7L8W6 267 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 ZBTB44Q8NCP5 570 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 PARD3BQ8TEW8 1205 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 SMARCE1Q969G3 411 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 TIGD1Q96MW7 591 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 MMS19Q96T76 1030 aa17.33■□□□□ 0.36
COL1A1-205ENST00000476387 ZNF638Q14966 1978 aaKnown RBP17.33■□□□□ 0.36
COL1A1-205ENST00000476387 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-205ENST00000476387 SOBPA7XYQ1 873 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 ACAT1P24752 427 aaKnown RBP17.32■□□□□ 0.36
COL1A1-205ENST00000476387 DDX6P26196 483 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL1A1-205ENST00000476387 RPL13P26373 211 aaKnown RBP17.32■□□□□ 0.36
COL1A1-205ENST00000476387 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 NFIL3Q16649 462 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 SOWAHAQ2M3V2 549 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 INTS6LQ5JSJ4 861 aaKnown RBP17.32■□□□□ 0.36
COL1A1-205ENST00000476387 SUMF1Q8NBK3 374 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 BPIFB1Q8TDL5 484 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 GIPC2Q8TF65 315 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 ATRIPQ8WXE1 791 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 RUBCNQ92622 972 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 SYAP1Q96A49 352 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-205ENST00000476387 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 TMLHEQ9NVH6 421 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 OBSL1O75147 1896 aa17.32■□□□□ 0.36
COL1A1-205ENST00000476387 GABRDO14764 452 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 LILRB5O75023 590 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 CSH1P0DML2 217 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 CSH2P0DML3 217 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 HMGA1P17096 107 aaKnown RBP17.31■□□□□ 0.36
COL1A1-205ENST00000476387 CCNE1P24864 410 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 ATICP31939 592 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 CDR1P51861 262 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-205ENST00000476387 CYP4F8P98187 520 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 PPP2R5DQ14738 602 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 OSTM1Q86WC4 334 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 RALGPS2Q86X27 583 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-205ENST00000476387 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-205ENST00000476387 ZNF516Q92618 1163 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 LRRC3BQ96PB8 259 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 PKMYT1Q99640 499 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 GTPBP4Q9BZE4 634 aaKnown RBP17.31■□□□□ 0.36
COL1A1-205ENST00000476387 GZF1Q9H116 711 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-205ENST00000476387 LMAN1LQ9HAT1 526 aa17.31■□□□□ 0.36
COL1A1-205ENST00000476387 MYBPHLA2RUH7 354 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 MAPK13O15264 365 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 STAU1O95793 577 aaKnown RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 CST3P01034 146 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 F11P03951 625 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 CHRNB1P11230 501 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 KRT13P13646 458 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 CCR3P51677 355 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 NRLP54845 237 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 NLRP12P59046 1061 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 MYL6P60660 151 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms