RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 FAM171BQ6P995 826 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 EZH1Q92800 747 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-228ENST00000476267 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
MRPL55-228ENST00000476267 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 GTF3C4Q9UKN8 822 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 PCDHB13Q9Y5F0 798 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 LAMA1P25391 3075 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 GOLGA8IPA6NC78 632 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 GOLGA8JA6NMD2 632 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 HUS1O60921 280 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 HOXD13P35453 343 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 TXLNAP40222 546 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 BFSP1Q12934 665 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 SLC39A14Q15043 492 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 NAIF1Q69YI7 327 aaPredicted RBP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 CSGALNACT2Q8N6G5 542 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 GLIS3Q8NEA6 775 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 CACTINQ8WUQ7 758 aaKnown RBP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 KBTBD7Q8WVZ9 684 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 GAB3Q8WWW8 586 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 MRPS31Q92665 395 aaKnown RBP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 FUBP3Q96I24 572 aaKnown RBP eCLIP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 CNTNAP3BQ96NU0 1288 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 CNTNAP3Q9BZ76 1288 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 PCIF1Q9H4Z3 704 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 INTS13Q9NVM9 706 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 GCNT4Q9P109 453 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 UXTQ9UBK9 157 aaPredicted RBP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 MAGED2Q9UNF1 606 aaPredicted RBP14.08□□□□□ -0.16
MRPL55-228ENST00000476267 MTMR6Q9Y217 621 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.16
MRPL55-228ENST00000476267 KMT2BQ9UMN6 2715 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 GDF9O60383 454 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 PRPF6O94906 941 aaKnown RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 EGFP01133 1207 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 ADRB1P08588 477 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 IDEP14735 1019 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 TCF3P15923 654 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 GJA4P35212 333 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 LHX1P48742 406 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 NASPP49321 788 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 RPL10AP62906 217 aaKnown RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 RBP5P82980 135 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 MYL7Q01449 175 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 FAM160A1Q05DH4 1040 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 MTF1Q14872 753 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 PDGFRLQ15198 375 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 E2F4Q16254 413 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 DPH6Q7L8W6 267 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 ADGRF2Q8IZF7 708 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 GPD1LQ8N335 351 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 OR5B17Q8NGF7 314 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 OSCP1Q8WVF1 389 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 TMEM206Q9H813 350 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 CRTAC1Q9NQ79 661 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 PANK4Q9NVE7 773 aa14.07□□□□□ -0.16
MRPL55-228ENST00000476267 POLR3BQ9NW08 1133 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-228ENST00000476267 NCOR2Q9Y618 2525 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
MRPL55-228ENST00000476267 RNF40O75150 1001 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 ATP2C2O75185 946 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 EPN2O95208 641 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 LMO2P25791 158 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 STAT6P42226 847 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 MAGEA11P43364 429 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 PXNP49023 591 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-228ENST00000476267 GALK1P51570 392 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 ZXDBP98169 803 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 GRSF1Q12849 480 aaKnown RBP eCLIP14.06□□□□□ -0.16
MRPL55-228ENST00000476267 EML3Q32P44 896 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-228ENST00000476267 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-228ENST00000476267 CBWD2Q8IUF1 395 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 SYCP3Q8IZU3 236 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 INTS4Q96HW7 963 aaKnown RBP14.06□□□□□ -0.16
MRPL55-228ENST00000476267 LOXL4Q96JB6 756 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 CYP2S1Q96SQ9 504 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 PANK2Q9BZ23 570 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 ECT2Q9H8V3 914 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 KBTBD4Q9NVX7 518 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 NME7Q9Y5B8 376 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 RALGAPA1Q6GYQ0 2036 aa14.06□□□□□ -0.16
MRPL55-228ENST00000476267 C2orf78A6NCI8 922 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 FOXD2O60548 495 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-228ENST00000476267 ATG13O75143 517 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 RPP40O75818 363 aaKnown RBP14.05□□□□□ -0.16
MRPL55-228ENST00000476267 AKAP3O75969 853 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 KRT19P08727 400 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 DRD1P21728 446 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 PCSK1P29120 753 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 LIMK1P53667 647 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms