RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 EXOC6Q8TAG9 804 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 OSCP1Q8WVF1 389 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 DDX12PQ92771 950 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 ZFRQ96KR1 1074 aaKnown RBP5.27□□□□□ -1.57
USP4-209ENST00000475873 SUSD3Q96L08 255 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 CEP170P1Q96L14 293 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 JPH2Q9BR39 696 aaPredicted RBP5.27□□□□□ -1.57
USP4-209ENST00000475873 TEKT3Q9BXF9 490 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 FAM124BQ9H5Z6 455 aaPredicted RBP5.27□□□□□ -1.57
USP4-209ENST00000475873 DUS2Q9NX74 493 aaKnown RBP5.27□□□□□ -1.57
USP4-209ENST00000475873 BARHL2Q9NY43 387 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 MAFFQ9ULX9 164 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 PCDHB1Q9Y5F3 818 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 TIMM13Q9Y5L4 95 aaPredicted RBP5.27□□□□□ -1.57
USP4-209ENST00000475873 SNX11Q9Y5W9 270 aa5.27□□□□□ -1.57
USP4-209ENST00000475873 TP53BP1Q12888 1972 aaPredicted RBP5.27□□□□□ -1.57
USP4-209ENST00000475873 KIF26BQ2KJY2 2108 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 A0A1W2PNU3 283 aaPredicted RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 E7EWF7 191 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 SH2B2O14492 632 aaPredicted RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 ASAP2O43150 1006 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 KLK10O43240 276 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 TRAPPC3O43617 180 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 TRAK2O60296 914 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 CER1O95813 267 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 CYP17A1P05093 508 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ELAVL4P26378 380 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 GRNP28799 593 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 TNFRSF8P28908 595 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 HNF1BP35680 557 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ARL2P36404 184 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 WASP42768 502 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 GRK6P43250 576 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 CSNK1EP49674 416 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 GNAQP50148 359 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 UCNP55089 124 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 PCBP4P57723 403 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 NLRP12P59046 1061 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 PSMC5P62195 406 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 FOXK1P85037 733 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 IL9RQ01113 521 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 CYP4A11Q02928 519 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 POU5F1BQ06416 359 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 BFSP1Q12934 665 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 GPR17Q13304 367 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 BYSLQ13895 437 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 KIF19Q2TAC6 998 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 XKR4Q5GH76 650 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 EOGTQ5NDL2 527 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ZNF787Q6DD87 383 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ALKAL1Q6UXT8 129 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 PPP4R3CPQ6ZMV5 832 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 TICAM2Q86XR7 235 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 TEX2Q8IWB9 1127 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 DHX40Q8IX18 779 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 FAM26EQ8N5C1 309 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ETNPPLQ8TBG4 499 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 LRRC15Q8TF66 581 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ATP2A3Q93084 1043 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 C18orf25Q96B23 403 aaPredicted RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 YTHDC1Q96MU7 727 aaKnown RBP5.26□□□□□ -1.57
USP4-209ENST00000475873 PHF12Q96QT6 1004 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 CYP2S1Q96SQ9 504 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ACOX2Q99424 681 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 NFKBIZQ9BYH8 718 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 EPN3Q9H201 632 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ASCL3Q9NQ33 180 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 SUSD2Q9UGT4 822 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 ASB3Q9Y575 518 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 PCDHGA1Q9Y5H4 931 aa5.26□□□□□ -1.57
USP4-209ENST00000475873 HIVEP3Q5T1R4 2406 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 A0A0A0MRY4 1105 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 A0A1B0GTL3 188 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 ERICH2A1L162 156 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 BTBD18B2RXH4 712 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 KCNJ18B7U540 433 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 H0Y8X5 98 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 ENC1O14682 589 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 SCAMP3O14828 347 aaKnown RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 BCAT2O15382 392 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 PCDHGA12O60330 932 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 RFPL3O75679 317 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 OAZ2O95190 189 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 KAT7O95251 611 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 TDP2O95551 362 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 MPOP05164 745 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 FAM87AP0C7U9 286 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 GNSP15586 552 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 CDC25CP30307 473 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 AVPR1AP37288 418 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 RFC5P40937 340 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 ALDH1A3P47895 512 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 GPR15P49685 360 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 MFAP1P55081 439 aaKnown RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 SKOR1P84550 965 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 PTH1RQ03431 593 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 MXD4Q14582 209 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 ZNF268Q14587 947 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 SF3A1Q15459 793 aaKnown RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 SHBQ15464 509 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms