RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ANKRD62A6NC57 917 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 GPD2P43304 727 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 CACNA2D1P54289 1103 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 PTP4A2Q12974 167 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 ERCC6LQ2NKX8 1250 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 PTPN20Q4JDL3 420 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 SPRED2Q7Z698 418 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 CTNNBL1Q8WYA6 563 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-217ENST00000475693 SYT15Q9BQS2 421 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 VN1R3Q9BXE9 311 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 MRPL9Q9BYD2 267 aaKnown RBP19.15■□□□□ 0.66
ATG4B-217ENST00000475693 ST7Q9NRC1 585 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 TMEM30AQ9NV96 361 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 ADAM22Q9P0K1 906 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 CCDC66A2RUB6 948 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 ALDH7A1P49419 539 aaKnown RBP19.15■□□□□ 0.66
ATG4B-217ENST00000475693 PMF1Q6P1K2 205 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 LCLAT1Q6UWP7 414 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 MON1BQ7L1V2 547 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 FUKQ8N0W3 1084 aa19.15■□□□□ 0.66
ATG4B-217ENST00000475693 CNOT8Q9UFF9 292 aaKnown RBP19.15■□□□□ 0.66
ATG4B-217ENST00000475693 LCHNA4D1U4 455 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 EFCAB8A8MWE9 144 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 MED7O43513 233 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 KIF5CO60282 957 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 GABBR2O75899 941 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 CSPG5O95196 566 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 TMEM253P0C7T8 217 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 PDE4CQ08493 712 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 RTP2Q5QGT7 225 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 C9orf50Q5SZB4 431 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 C10orf76Q5T2E6 689 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 FUT10Q6P4F1 479 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 TMEM86AQ8N2M4 240 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 TMEM35BQ8NCS4 154 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 PCED1BQ96HM7 432 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 B3GNT5Q9BYG0 378 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 VWA8A3KMH1 1905 aa19.14■□□□□ 0.65
ATG4B-217ENST00000475693 LHX1P48742 406 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 GPC5P78333 572 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 YWHAHQ04917 246 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 RSPO2Q6UXX9 243 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 ZBED2Q9BTP6 218 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 HTATIP2Q9BUP3 242 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 COLEC11Q9BWP8 271 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 ZNF518BQ9C0D4 1074 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 CTTNBP2NLQ9P2B4 639 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 PCDHB8Q9UN66 801 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 PACSIN2Q9UNF0 486 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 GRXCR1A8MXD5 290 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 C2CD2LO14523 706 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 NCK2O43639 380 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 PALMO75781 387 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 BAIAP3O94812 1187 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 ERBB2P04626 1255 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 CYP11A1P05108 521 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 DNA2P51530 1060 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 VARS2Q5ST30 1063 aaKnown RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 DAB2IPQ5VWQ8 1189 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 FAM109BQ6ICB4 259 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 KCNT2Q6UVM3 1135 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 PRSS55Q6UWB4 352 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 METTL23Q86XA0 190 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 TTC39CQ8N584 583 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 UBXN4Q92575 508 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 PIWIL1Q96J94 861 aaKnown RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 KCNK16Q96T55 309 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 MED10Q9BTT4 135 aa19.13■□□□□ 0.65
ATG4B-217ENST00000475693 LUC7LQ9NQ29 371 aaKnown RBP19.13■□□□□ 0.65
ATG4B-217ENST00000475693 TMEM189-UBE2V1I3L0A0 370 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 ZRANB2O95218 330 aaKnown RBP eCLIP19.12■□□□□ 0.65
ATG4B-217ENST00000475693 GJB5O95377 273 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 FTCDO95954 541 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 MYOGP15173 224 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 RPL17P18621 184 aaKnown RBP19.12■□□□□ 0.65
ATG4B-217ENST00000475693 MMP8P22894 467 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 CLCN6P51797 869 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 ARPP19P56211 112 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 PKDCCQ504Y2 493 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 ZNF662Q6ZS27 426 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 ERICH1Q86X53 443 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 NDRG1Q92597 394 aaKnown RBP19.12■□□□□ 0.65
ATG4B-217ENST00000475693 TNIP3Q96KP6 325 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 NUP85Q9BW27 656 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 GRID2IPA4D2P6 1211 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 TMEM110-MUSTN1A8MSY1 372 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 TRIM72Q6ZMU5 477 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 STKLD1Q8NE28 680 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 PGLYRP2Q96PD5 576 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 TSGA10Q9BZW7 698 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 LHX5Q9H2C1 402 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 TSC2P49815 1807 aa19.12■□□□□ 0.65
ATG4B-217ENST00000475693 GOLGA8SH3BPF8 625 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 TADA3O75528 432 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 CDH5P33151 784 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-217ENST00000475693 PDCLQ13371 301 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 PHF13Q86YI8 300 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-217ENST00000475693 MYLPFQ96A32 169 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 IGSF21Q96ID5 467 aa19.11■□□□□ 0.65
ATG4B-217ENST00000475693 PSMB7Q99436 277 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms