RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ADAMTS5Q9UNA0 930 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 NUMBLQ9Y6R0 609 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ZNF541Q9H0D2 1346 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 hCG_2014768A0A024R1R8 64 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 LRRIQ4A6NIV6 560 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 A6NJR5 290 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 EXTL3O43909 919 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 PSMG1O95456 288 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 VNN1O95497 513 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SUPT20HL2P0C7V6 817 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 EIF4BP23588 611 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 RASSF2P50749 326 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 GCNT1Q02742 428 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CLUL1Q15846 466 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SUPT20HL1Q3ZLR7 823 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 DLK2Q6UY11 383 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 USP37Q86T82 979 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 MCOLN2Q8IZK6 566 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 ART4Q93070 314 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SLC35B4Q969S0 331 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 FNBP1Q96RU3 617 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CCDC28BQ9BUN5 200 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CDC42EP4Q9H3Q1 356 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 RMI1Q9H9A7 625 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 ZNF112Q9UJU3 913 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 HARSP12081 509 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 GLRA2P23416 452 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CYP1B1Q16678 543 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CATSPERGQ6ZRH7 1159 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CCDC25Q86WR0 208 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 TRPM4Q8TD43 1214 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 DTX3LQ8TDB6 740 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 LZICQ8WZA0 190 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 LENG1Q96BZ8 264 aaPredicted RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 FAM118BQ9BPY3 351 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 AAASQ9NRG9 546 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 CHST7Q9NS84 486 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 AGO2Q9UKV8 859 aaKnown RBP13.66□□□□□ -0.22
CCNL1-216ENST00000475298 MTUS1Q9ULD2 1270 aa13.66□□□□□ -0.22
CCNL1-216ENST00000475298 NFASCO94856 1347 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 RBM47A0AV96 593 aaKnown RBP13.65□□□□□ -0.22
CCNL1-216ENST00000475298 MAGEB2O15479 319 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 DCTN3O75935 186 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 ACSL3O95573 720 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 GGPS1O95749 300 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 TGFB2P61812 414 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 TRIP13Q15645 432 aaPredicted RBP13.65□□□□□ -0.22
CCNL1-216ENST00000475298 ZACNQ401N2 412 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 TAF1BQ53T94 588 aaPredicted RBP13.65□□□□□ -0.22
CCNL1-216ENST00000475298 XKR3Q5GH77 459 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 DUS1LQ6P1R4 473 aaKnown RBP13.65□□□□□ -0.22
CCNL1-216ENST00000475298 ARHGEF18Q6ZSZ5 1173 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 NAT14Q8WUY8 206 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 CENPKQ9BS16 269 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 SLCO1B3Q9NPD5 702 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 PHTF1Q9UMS5 762 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 A0A0J9YVX5 310 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 PODXLO00592 558 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 TP73O15350 636 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 MAP3K7O43318 606 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 DKC1O60832 514 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCNL1-216ENST00000475298 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
CCNL1-216ENST00000475298 CETPP11597 493 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 OAZ1P54368 228 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 STRN3Q13033 797 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 DNAJC3Q13217 504 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 PSMD6Q15008 389 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 ZNF302Q9NR11 478 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 PARP2Q9UGN5 583 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 WASF2Q9Y6W5 498 aa13.65□□□□□ -0.22
CCNL1-216ENST00000475298 PCNTO95613 3336 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 PABPC4LP0CB38 370 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 ATP5DP30049 168 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 BAG6P46379 1132 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 KRT17Q04695 432 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 P3H1Q32P28 736 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms