RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CDC25CP30307 473 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 GDI1P31150 447 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 CASP4P49662 377 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 TNNC1P63316 161 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 TRPC3Q13507 836 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 ANGPT1Q15389 498 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
PDPN-204ENST00000475043 GAREM2Q75VX8 874 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 DPH6Q7L8W6 267 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 OSTM1Q86WC4 334 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 SPATA2LQ8IUW3 424 aaPredicted RBP10.1□□□□□ -0.79
PDPN-204ENST00000475043 C12orf56Q8IXR9 622 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 YAF2Q8IY57 180 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 PJA1Q8NG27 643 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 IRF7Q92985 503 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 MAGED2Q9UNF1 606 aaPredicted RBP10.1□□□□□ -0.79
PDPN-204ENST00000475043 MUC6Q6W4X9 2439 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 DENND4CQ5VZ89 1909 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 OBSL1O75147 1896 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 ZNF638Q14966 1978 aaKnown RBP10.09□□□□□ -0.79
PDPN-204ENST00000475043 FAM237AA0A1B0GTK4 181 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 A0A1W2PQ27 194 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 A0A1W2PQ64 194 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 A0A1W2PQD8 194 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 MYBPHLA2RUH7 354 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 GOLGA6L4A6NEF3 574 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 FAM170BA6NMN3 283 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 HEPACAM2A8MVW5 462 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 GABRDO14764 452 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 ZNF263O14978 683 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 ATP2C2O75185 946 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 LRRN2O75325 713 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 ZNF202O95125 648 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 KIF20AO95235 890 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 PDGFRBP09619 1106 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 LMO2P25791 158 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 GPR15P49685 360 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 PSMC1P62191 440 aaKnown RBP10.09□□□□□ -0.79
PDPN-204ENST00000475043 RPL10AP62906 217 aaKnown RBP10.09□□□□□ -0.79
PDPN-204ENST00000475043 CYP4F8P98187 520 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 CYP27A1Q02318 531 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 BIRC3Q13489 604 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 DDR2Q16832 855 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 CCDC142Q17RM4 750 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 WDR72Q3MJ13 1102 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 SDHAF4Q5VUM1 108 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 CEP135Q66GS9 1140 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 KRBA2Q6ZNG9 492 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 ARID3BQ8IVW6 561 aaPredicted RBP10.09□□□□□ -0.79
PDPN-204ENST00000475043 MFSD6LQ8IWD5 586 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 SPATA18Q8TC71 538 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 DEPDC1BQ8WUY9 529 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 KBTBD7Q8WVZ9 684 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 ZNF516Q92618 1163 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 DNASE1L2Q92874 299 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 E2F7Q96AV8 911 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 CCDC34Q96HJ3 373 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 SYT15Q9BQS2 421 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 SNX25Q9H3E2 840 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 GOLPH3LQ9H4A5 285 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 TRPV4Q9HBA0 871 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
PDPN-204ENST00000475043 CDH9Q9ULB4 789 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 MAPK8IP1Q9UQF2 711 aa10.09□□□□□ -0.79
PDPN-204ENST00000475043 MTF2Q9Y483 593 aaPredicted RBP10.09□□□□□ -0.79
PDPN-204ENST00000475043 NCANO14594 1321 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 ZDBF2Q9HCK1 2354 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 COL4A2P08572 1712 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 PDXKO00764 312 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 CALUO43852 315 aaPredicted RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 NR3C1P04150 777 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 CSH1P0DML2 217 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 CSH2P0DML3 217 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 MYL6P60660 151 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 NUCB2P80303 420 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 ZNF852Q6ZMS4 543 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 C4orf50Q6ZRC1 276 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 CSGALNACT1Q8TDX6 532 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 PARD3BQ8TEW8 1205 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 SYAP1Q96A49 352 aaPredicted RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 RSPRY1Q96DX4 576 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 PKMYT1Q99640 499 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 MRPL45Q9BRJ2 306 aaKnown RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 DDX23Q9BUQ8 820 aaKnown RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 BCO2Q9BYV7 579 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 KCTD10Q9H3F6 313 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 TASP1Q9H6P5 420 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 ABCB6Q9NP58 842 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 LTB4R2Q9NPC1 389 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 NDRG2Q9UN36 371 aaKnown RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 FRMD4BQ9Y2L6 1034 aa10.08□□□□□ -0.8
PDPN-204ENST00000475043 MRPS17Q9Y2R5 130 aaKnown RBP10.08□□□□□ -0.8
PDPN-204ENST00000475043 PATJQ8NI35 1801 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 KIF26AQ9ULI4 1882 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms