RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MYLPFQ96A32 169 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 APOL5Q9BWW9 433 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 NT5C1AQ9BXI3 368 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 B3GNT5Q9BYG0 378 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 ELOVL4Q9GZR5 314 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 SIX2Q9NPC8 291 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 SLC27A5Q9Y2P5 690 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 PTPRDP23468 1912 aa18.04■□□□□ 0.48
SCAF11-206ENST00000474828 CLUHO75153 1309 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 NOTCH4Q99466 2003 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 SMTNL1A8MU46 457 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 CCL16O15467 120 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 PTPN2P17706 415 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 ALDH1A3P47895 512 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 ZNF132P52740 706 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 RAD23BP54727 409 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 KCNMA1Q12791 1236 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 EXOC3L4Q17RC7 722 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 PRSS36Q5K4E3 855 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 TMC8Q8IU68 726 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 SPATA2LQ8IUW3 424 aaPredicted RBP18.03■□□□□ 0.48
SCAF11-206ENST00000474828 FUKQ8N0W3 1084 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 AOPEPQ8N6M6 819 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 ADAMTS19Q8TE59 1207 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 SPATA17Q96L03 361 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 C8orf48Q96LL4 319 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 FAM81BQ96LP2 452 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 MYRFLQ96LU7 910 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 KREMEN1Q96MU8 473 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 CSNK1G1Q9HCP0 422 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 GCNT4Q9P109 453 aa18.03■□□□□ 0.48
SCAF11-206ENST00000474828 SLC9A1P19634 815 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 CYP2F1P24903 491 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 YWHAEP62258 255 aaKnown RBP18.02■□□□□ 0.48
SCAF11-206ENST00000474828 RPL10AP62906 217 aaKnown RBP18.02■□□□□ 0.48
SCAF11-206ENST00000474828 HSP90AA4PQ58FG1 418 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 MDH1BQ5I0G3 518 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 ENOSF1Q7L5Y1 443 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 ACOT1Q86TX2 421 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 ARHGEF19Q8IW93 802 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 SLC4A11Q8NBS3 891 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 HNRNPABQ99729 332 aaKnown RBP18.02■□□□□ 0.48
SCAF11-206ENST00000474828 LPIN3Q9BQK8 851 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.02■□□□□ 0.485e-7■■■■■ 40.9
SCAF11-206ENST00000474828 TMEM30AQ9NV96 361 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 ABI2Q9NYB9 513 aaPredicted RBP18.02■□□□□ 0.48
SCAF11-206ENST00000474828 APEX2Q9UBZ4 518 aa18.02■□□□□ 0.48
SCAF11-206ENST00000474828 MOSPD3O75425 235 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 NOL4O94818 638 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 HMGA1P17096 107 aaKnown RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 EPHB3P54753 998 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 ARHGAP17Q68EM7 881 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 GRASPQ7Z6J2 395 aaPredicted RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 DNAJB7Q7Z6W7 309 aaPredicted RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 ZDHHC14Q8IZN3 488 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 TRMT2BQ96GJ1 504 aaKnown RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 TMEM176AQ96HP8 235 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 ZNF512Q96ME7 567 aaPredicted RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 UHRF1Q96T88 793 aaPredicted RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 HCFC1R1Q9NWW0 138 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 KIAA1257Q9ULG3 409 aa18.01■□□□□ 0.47
SCAF11-206ENST00000474828 ZFP37Q9Y6Q3 630 aaPredicted RBP18.01■□□□□ 0.47
SCAF11-206ENST00000474828 BDP1A6H8Y1 2624 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 SPDYE4A6NLX3 237 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 LGALS16A8MUM7 142 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 SOAT2O75908 522 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 RHOP08100 348 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 CD58P19256 250 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 BDNFP23560 247 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 COPB1P53618 953 aaKnown RBP18■□□□□ 0.47
SCAF11-206ENST00000474828 MGAT5BQ3V5L5 792 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 PABPC1LQ4VXU2 614 aaKnown RBP18■□□□□ 0.47
SCAF11-206ENST00000474828 ITIH5Q86UX2 942 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 PPM1KQ8N3J5 372 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 C12orf29Q8N999 325 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 KAT5Q92993 513 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 SEPT5Q99719 369 aaPredicted RBP18■□□□□ 0.47
SCAF11-206ENST00000474828 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 TTLL2Q9BWV7 592 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 NAA15Q9BXJ9 866 aaKnown RBP18■□□□□ 0.47
SCAF11-206ENST00000474828 ZNF518BQ9C0D4 1074 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 DNAI2Q9GZS0 605 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 PIDD1Q9HB75 910 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 IL21Q9HBE4 155 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 PLCB1Q9NQ66 1216 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 TAB2Q9NYJ8 693 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 IL37Q9NZH6 218 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 EPS15L1Q9UBC2 864 aa18■□□□□ 0.47
SCAF11-206ENST00000474828 PAEPP09466 180 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 ATP1A3P13637 1013 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 CCR2P41597 374 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 CACNA2D1P54289 1103 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 ZNF445P59923 1031 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 NTHL1P78549 312 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 LRMPQ12912 555 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 SLC5A9Q2M3M2 681 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 IQCEQ6IPM2 695 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 LRSAM1Q6UWE0 723 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms