RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-210ENST00000474568 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
ITGB1-210ENST00000474568 GCNAQ96QF7 691 aa17.09■□□□□ 0.33
ITGB1-210ENST00000474568 IL21Q9HBE4 155 aa17.09■□□□□ 0.33
ITGB1-210ENST00000474568 ZFP14Q9HCL3 533 aa17.09■□□□□ 0.33
ITGB1-210ENST00000474568 NCANO14594 1321 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 SLC38A8A6NNN8 435 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 CLDN5O00501 218 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 PSMA7O14818 248 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 HMGA1P17096 107 aaKnown RBP17.08■□□□□ 0.32
ITGB1-210ENST00000474568 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
ITGB1-210ENST00000474568 BMP6P22004 513 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 CCNE1P24864 410 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 RPL10AP62906 217 aaKnown RBP17.08■□□□□ 0.32
ITGB1-210ENST00000474568 ARHGAP15Q53QZ3 475 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 PCED1BQ96HM7 432 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 VRTNQ9H8Y1 702 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
ITGB1-210ENST00000474568 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
ITGB1-210ENST00000474568 FGF19O95750 216 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 ASS1P00966 412 aaKnown RBP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 CSH1P0DML2 217 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 CSH2P0DML3 217 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 P4HA1P13674 534 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 NPR3P17342 541 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 CDC25CP30307 473 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 AVPR2P30518 371 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 GRIK1P39086 918 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 STX17P56962 302 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 MORC3Q14149 939 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 VITQ6UXI7 678 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 MYCBPAPQ8TBZ2 947 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 ELSPBP1Q96BH3 223 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 RSPRY1Q96DX4 576 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 FUBP3Q96I24 572 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 MKNK1Q9BUB5 465 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 ZNF518BQ9C0D4 1074 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
ITGB1-210ENST00000474568 ARHGEF3Q9NR81 526 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 SLC2A4RGQ9NR83 387 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 WNT16Q9UBV4 365 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 HMGXB4Q9UGU5 601 aa17.07■□□□□ 0.32
ITGB1-210ENST00000474568 HEPACAM2A8MVW5 462 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
ITGB1-210ENST00000474568 FAM163BP0C2L3 166 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 ASPAP45381 313 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 MXI1P50539 228 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 CACNA2D1P54289 1103 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 NOP14P78316 857 aaKnown RBP17.06■□□□□ 0.32
ITGB1-210ENST00000474568 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 KRT39Q6A163 491 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 ACOT1Q86TX2 421 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 ARID3BQ8IVW6 561 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-210ENST00000474568 TMEM105Q8N8V8 129 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 TAF4BQ92750 862 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 DHTKD1Q96HY7 919 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-210ENST00000474568 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 B3GNT5Q9BYG0 378 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 IMPG2Q9BZV3 1241 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 GPR88Q9GZN0 384 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 TBC1D17Q9HA65 648 aa17.06■□□□□ 0.32
ITGB1-210ENST00000474568 F8VP50 259 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 DPYSL4O14531 572 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 PI15O43692 258 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 NOL4O94818 638 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 PRAMEF12O95522 483 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 F11P03951 625 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 CD58P19256 250 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 ANXA13P27216 316 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 GDI1P31150 447 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 MAGEA11P43364 429 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 NDST1P52848 882 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 NLRP12P59046 1061 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-210ENST00000474568 TXNDC8Q6A555 127 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 ASTLQ6HA08 431 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-210ENST00000474568 TMEM150AQ86TG1 271 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 ZC3H3Q8IXZ2 948 aaKnown RBP17.05■□□□□ 0.32
ITGB1-210ENST00000474568 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
ITGB1-210ENST00000474568 TRMT61BQ9BVS5 477 aaKnown RBP17.05■□□□□ 0.32
ITGB1-210ENST00000474568 SLC46A2Q9BY10 475 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 TASP1Q9H6P5 420 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 BRD9Q9H8M2 597 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
ITGB1-210ENST00000474568 TADA3O75528 432 aa17.04■□□□□ 0.32
ITGB1-210ENST00000474568 GTF2H1P32780 548 aa17.04■□□□□ 0.32
ITGB1-210ENST00000474568 CCDC40Q4G0X9 1142 aa17.04■□□□□ 0.32
ITGB1-210ENST00000474568 CBWD6Q4V339 395 aa17.04■□□□□ 0.32
ITGB1-210ENST00000474568 SLC44A4Q53GD3 710 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms