RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 LCA5LO95447 670 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 ADH1AP07327 375 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 CA3P07451 260 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 FAM228BP0C875 321 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 GRIK1P39086 918 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 TUFMP49411 452 aaKnown RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 RPL10AP62906 217 aaKnown RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 FMO1Q01740 532 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 GPR17Q13304 367 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 ORC1Q13415 861 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 MRPL58Q14197 206 aaKnown RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 TAF12Q16514 161 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 PTPROQ16827 1216 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 SLC39A12Q504Y0 691 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 PPP1R26Q5T8A7 1209 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 TPGS2Q68CL5 300 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 VSTM1Q6UX27 236 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 OSTM1Q86WC4 334 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 CCAR2Q8N163 923 aaKnown RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 C12orf29Q8N999 325 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 SLC2A14Q8TDB8 520 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 SLC20A1Q8WUM9 679 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 ZNF592Q92610 1267 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 GOLGA1Q92805 767 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 C16orf45Q96MC5 204 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 DUSP16Q9BY84 665 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 UBXN6Q9BZV1 441 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 ZCWPW1Q9H0M4 648 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 LMAN2LQ9H0V9 348 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 LRRC4Q9HBW1 653 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 ABCB6Q9NP58 842 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 CYLDQ9NQC7 956 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 RRAGDQ9NQL2 400 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-206ENST00000474564 CHST7Q9NS84 486 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 ADAM22Q9P0K1 906 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 FNIP2Q9P278 1114 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 LCMT1Q9UIC8 334 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 TRIP11Q15643 1979 aa10.95□□□□□ -0.66
COL12A1-206ENST00000474564 A0A1W2PPC1 479 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 MYBPHLA2RUH7 354 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 F8W810 466 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 RBAK-RBAKDNI3L0D1 243 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TRIM66O15016 1216 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 SART1O43290 800 aaKnown RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 ATP2C2O75185 946 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 AP1G2O75843 785 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 CTSAP10619 480 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 CCDC130P13994 396 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 NPR3P17342 541 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 KLRC2P26717 231 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 OR1D2P34982 312 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 ALDH1A3P47895 512 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 NDUFV1P49821 464 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 VAV2P52735 878 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 ERVK-21P61565 698 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 GPC5P78333 572 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 SMAD3P84022 425 aaKnown RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TAP1Q03518 808 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 C1QBPQ07021 282 aaKnown RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 GPM6BQ13491 265 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 KIAA0319Q5VV43 1072 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 E4F1Q66K89 784 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 FAM171BQ6P995 826 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 RAD9BQ6WBX8 426 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 ZDHHC17Q8IUH5 632 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TMEM139Q8IV31 216 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 PASD1Q8IV76 773 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 SIX6OS1Q8N1H7 587 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 SLC30A5Q8TAD4 765 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 LNX1Q8TBB1 728 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 UBA3Q8TBC4 463 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TFAP2BQ92481 460 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 DDX1Q92499 740 aaKnown RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 MYLPFQ96A32 169 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 C18orf8Q96DM3 657 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 PCED1BQ96HM7 432 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 PPP1R13BQ96KQ4 1090 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TCF25Q9BQ70 676 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 DESI2Q9BSY9 194 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TRIM62Q9BVG3 475 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 DPEP3Q9H4B8 488 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 DMAP1Q9NPF5 467 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 ACP6Q9NPH0 428 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 TLR9Q9NR96 1032 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-206ENST00000474564 HSFX1Q9UBD0 423 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 MTRRQ9UBK8 725 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 HMGXB4Q9UGU5 601 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 MTUS1Q9ULD2 1270 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms