RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 PABPC4Q13310 644 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGN1P10-201ENST00000474557 RSPH3Q86UC2 560 aa3.41□□□□□ -1.86
HMGN1P10-201ENST00000474557 MED30Q96HR3 178 aa3.41□□□□□ -1.86
HMGN1P10-201ENST00000474557 C7orf25Q9BPX7 421 aa3.41□□□□□ -1.86
HMGN1P10-201ENST00000474557 TINAGL1Q9GZM7 467 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P10-201ENST00000474557 EMC7Q9NPA0 242 aa3.41□□□□□ -1.86
HMGN1P10-201ENST00000474557 DLDP09622 509 aaKnown RBP3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 PLA2G2AP14555 144 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 ADCYAP1R1P41586 468 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 TAF6P49848 677 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 RENBPP51606 427 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 CLCN2P51788 898 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 TPTEP56180 551 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 KRTAP10-3P60369 221 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 TROAPQ12815 778 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 FAM187BQ17R55 369 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 C4orf46Q504U0 113 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 SFRP4Q6FHJ7 346 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 FBXL14Q8N1E6 418 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 FAM109AQ8N4B1 249 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 PSD4Q8NDX1 1056 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 QRSL1Q9H0R6 528 aaKnown RBP3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 SERHLQ9NQF3 203 aa3.4□□□□□ -1.87
HMGN1P10-201ENST00000474557 BTBD19C9JJ37 291 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 FOXN3O00409 490 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 GCATO75600 419 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 PDHA1P08559 390 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 ATP13A4Q4VNC1 1196 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 MANEAQ5SRI9 462 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 SPATA2LQ8IUW3 424 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 AHI1Q8N157 1196 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 IQCF1Q8N6M8 205 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 DCBLD1Q8N8Z6 715 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 MKL1Q969V6 931 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 CIPCQ9C0C6 399 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 ARHGAP39Q9C0H5 1083 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 SMOC2Q9H3U7 446 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 TOPORSQ9NS56 1045 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 RAD54BQ9Y620 910 aa3.39□□□□□ -1.87
HMGN1P10-201ENST00000474557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 SERPINB2P05120 415 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 TCEA1P23193 301 aaKnown RBP3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 ENTPD1P49961 510 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 SLC5A3P53794 718 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 KEAP1Q14145 624 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 VPS53Q5VIR6 699 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 ICE2Q659A1 982 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 TAF2Q6P1X5 1199 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 SLC15A3Q8IY34 581 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 PPM1KQ8N3J5 372 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 DBF4BQ8NFT6 615 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 ZNF398Q8TD17 642 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 SCAMP4Q969E2 229 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 CCDC17Q96LX7 622 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 CNPPD1Q9BV87 410 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 SIK2Q9H0K1 926 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 PLSCR4Q9NRQ2 329 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 ZBTB40Q9NUA8 1239 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 DNM3Q9UQ16 869 aa3.38□□□□□ -1.87
HMGN1P10-201ENST00000474557 A0A1B0GVY2 172 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 PPP1R12AO14974 1030 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 CHEK2O96017 543 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 FESP07332 822 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 SBK3P0C264 359 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 CTSAP10619 480 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 ALDH5A1P51649 535 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 MRGPRG-AS1Q2M3A8 158 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 CNNM4Q6P4Q7 775 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 Q6ZWC4 215 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 B4GALNT4Q76KP1 1039 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 LRRTM3Q86VH5 581 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 RHOT1Q8IXI2 618 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 MAP4K1Q92918 833 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 SLC25A28Q96A46 364 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 TMX3Q96JJ7 454 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 GLOD4Q9HC38 313 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 SLC45A2Q9UMX9 530 aa3.37□□□□□ -1.87
HMGN1P10-201ENST00000474557 E9PLN8 166 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 LDB3O75112 727 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 TJP3O95049 919 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 PDE8BO95263 885 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 SESN3P58005 492 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 DALRD3Q5D0E6 543 aaKnown RBP3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 L1TD1Q5T7N2 865 aaKnown RBP3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 PDSS2Q86YH6 399 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 XAGE5Q8WWM1 108 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 VKORC1Q9BQB6 163 aa3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 SEMA4BQ9NPR2 832 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P10-201ENST00000474557 LPOP22079 712 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 MTX1Q13505 466 aa3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 PRTGQ2VWP7 1150 aa3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 FLYWCH1Q4VC44 716 aa3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 SFTPA1Q8IWL2 248 aa3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 TMEM8AQ9HCN3 771 aa3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 TDP1Q9NUW8 608 aa3.35□□□□□ -1.87
HMGN1P10-201ENST00000474557 ETAA1Q9NY74 926 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms