RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 LRRC43Q8N309 656 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 SLC35G2Q8TBE7 412 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 ZNF592Q92610 1267 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 DDX43Q9NXZ2 648 aaKnown RBP21.58■■□□□ 1.05
CDHR3-210ENST00000474330 TSPAN16Q9UKR8 245 aa21.58■■□□□ 1.05
CDHR3-210ENST00000474330 TIMM13Q9Y5L4 95 aaPredicted RBP21.58■■□□□ 1.05
CDHR3-210ENST00000474330 A0A0C4DFX4 3053 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 F8W810 466 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 I3L4J1 428 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 NRP1O14786 923 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 CYP1A2P05177 515 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 TYMPP19971 482 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 MMP8P22894 467 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 CASQ1P31415 396 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 NOP2P46087 812 aaKnown RBP21.58■■□□□ 1.04
CDHR3-210ENST00000474330 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.04
CDHR3-210ENST00000474330 METTL23Q86XA0 190 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 C1orf131Q8NDD1 294 aaKnown RBP21.58■■□□□ 1.04
CDHR3-210ENST00000474330 ZNF653Q96CK0 615 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 CALR3Q96L12 384 aaKnown RBP21.58■■□□□ 1.04
CDHR3-210ENST00000474330 ALS2CR12Q96Q35 445 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 ADAM22Q9P0K1 906 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 PCDHB8Q9UN66 801 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 PRG3Q9Y2Y8 225 aaPredicted RBP21.58■■□□□ 1.04
CDHR3-210ENST00000474330 PCDHGC5Q9Y5F6 944 aa21.58■■□□□ 1.04
CDHR3-210ENST00000474330 GPD2P43304 727 aa21.57■■□□□ 1.04
CDHR3-210ENST00000474330 HADHBP55084 474 aaKnown RBP21.57■■□□□ 1.04
CDHR3-210ENST00000474330 PTP4A2Q12974 167 aa21.57■■□□□ 1.04
CDHR3-210ENST00000474330 B3GALNT2Q8NCR0 500 aa21.57■■□□□ 1.04
CDHR3-210ENST00000474330 COLEC11Q9BWP8 271 aa21.57■■□□□ 1.04
CDHR3-210ENST00000474330 AVENQ9NQS1 362 aaPredicted RBP21.57■■□□□ 1.04
CDHR3-210ENST00000474330 FAM49BQ9NUQ9 324 aa21.57■■□□□ 1.04
CDHR3-210ENST00000474330 CNOT8Q9UFF9 292 aaKnown RBP21.57■■□□□ 1.04
CDHR3-210ENST00000474330 FAN1Q9Y2M0 1017 aa21.57■■□□□ 1.04
CDHR3-210ENST00000474330 M0QYV0 167 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 TRAPPC3O43617 180 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 ARHGEF15O94989 841 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 PTPN1P18031 435 aaKnown RBP21.56■■□□□ 1.04
CDHR3-210ENST00000474330 SLC11A1P49279 550 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 PKDCCQ504Y2 493 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 FAM117BQ6P1L5 589 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 MYLIPQ8WY64 445 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 ZNF689Q96CS4 500 aaPredicted RBP21.56■■□□□ 1.04
CDHR3-210ENST00000474330 C11orf70Q9BRQ4 267 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 OSGEPQ9NPF4 335 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 CDH9Q9ULB4 789 aa21.56■■□□□ 1.04
CDHR3-210ENST00000474330 TADA2AO75478 443 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 MTA2O94776 668 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 CA3P07451 260 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 GALTP07902 379 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 GOLGA7BQ2TAP0 167 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 LIN9Q5TKA1 542 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.55■■□□□ 1.04
CDHR3-210ENST00000474330 MMS22LQ6ZRQ5 1243 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 ERICH1Q86X53 443 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 TPCN2Q8NHX9 752 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 LPIN3Q9BQK8 851 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 SLC28A3Q9HAS3 691 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 RC3H2Q9HBD1 1191 aaKnown RBP21.55■■□□□ 1.04
CDHR3-210ENST00000474330 CTTNBP2NLQ9P2B4 639 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 UVRAGQ9P2Y5 699 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 CYTH4Q9UIA0 394 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 ADAM28Q9UKQ2 775 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 GJB5O95377 273 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 CALB1P05937 261 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 RRM1P23921 792 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 ACAT1P24752 427 aaKnown RBP21.55■■□□□ 1.04
CDHR3-210ENST00000474330 PCSK1P29120 753 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 KIAA0319Q5VV43 1072 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 UBA3Q8TBC4 463 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 RTP3Q9BQQ7 232 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 SYT15Q9BQS2 421 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 ACBD6Q9BR61 282 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 MARCH5Q9NX47 278 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 HCSTQ9UBK5 93 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 HESX1Q9UBX0 185 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 COG5Q9UP83 839 aa21.55■■□□□ 1.04
CDHR3-210ENST00000474330 KIAA1671Q9BY89 1806 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 LCHNA4D1U4 455 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 GRID2IPA4D2P6 1211 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 CTAGE9A4FU28 777 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 ATMINO43313 823 aaPredicted RBP21.54■■□□□ 1.04
CDHR3-210ENST00000474330 ATP2C2O75185 946 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 PALMO75781 387 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 SETSIPP0DME0 302 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 PSMC1P62191 440 aaKnown RBP21.54■■□□□ 1.04
CDHR3-210ENST00000474330 OVOS1Q6IE37 1185 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 TTC30AQ86WT1 665 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 THEM5Q8N1Q8 247 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 ANKRD52Q8NB46 1076 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 HNRNPABQ99729 332 aaKnown RBP21.54■■□□□ 1.04
CDHR3-210ENST00000474330 NAPGQ99747 312 aaPredicted RBP21.54■■□□□ 1.04
CDHR3-210ENST00000474330 CWH43Q9H720 699 aa21.54■■□□□ 1.04
CDHR3-210ENST00000474330 SYN3O14994 580 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 CCDC130P13994 396 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 BCAR1P56945 870 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 PTPN20Q4JDL3 420 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 C2CD6Q53TS8 623 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 CMTR2Q8IYT2 770 aaKnown RBP21.53■■□□□ 1.04
CDHR3-210ENST00000474330 MSANTD4Q8NCY6 345 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms