RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 STRIP2Q9ULQ0 834 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 ARHGEF35A5YM69 484 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 IFNB1P01574 187 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 GYS1P13807 737 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 RGS2P41220 211 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 MTM1Q13496 603 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 FNBP1LQ5T0N5 605 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 LPCAT4Q643R3 524 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 RBM17Q96I25 401 aaKnown RBP19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 SERAC1Q96JX3 654 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 AGBL1Q96MI9 1066 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 ACCSQ96QU6 501 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 EPB41L1Q9H4G0 881 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 ZNF831Q5JPB2 1677 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 SMCHD1A6NHR9 2005 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 PGM3O95394 542 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 MT-ND3P03897 115 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 VCLP18206 1134 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 ATP2B4P23634 1241 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 NSFP46459 744 aaKnown RBP19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 OLFML2BQ68BL8 750 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 SLFN13Q68D06 897 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 KYAT3Q6YP21 454 aaKnown RBP19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 PRPF39Q86UA1 669 aaKnown RBP19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 HAUS1Q96CS2 278 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 TRIM11Q96F44 468 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 APOPT1Q96IL0 206 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 LXNQ9BS40 222 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 TMEM121Q9BTD3 319 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 TOPORSQ9NS56 1045 aaPredicted RBP19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 PTTG2Q9NZH5 202 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 COQ4Q9Y3A0 265 aa19.5■□□□□ 0.71
ECHDC1-214ENST00000474289 STIP1P31948 543 aaKnown RBP19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 OASLQ15646 514 aaKnown RBP19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 MON1BQ7L1V2 547 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 CIDEBQ9UHD4 219 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 CHMP2BQ9UQN3 213 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 FARP1Q9Y4F1 1045 aaPredicted RBP19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 GAS7O60861 476 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 CCDC166P0CW27 439 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 TCF4P15884 667 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 DESP17661 470 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 HPCAP84074 193 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 ZFYVE27Q5T4F4 411 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 ANKRD22Q5VYY1 191 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 AAGABQ6PD74 315 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 MFSD7Q6UXD7 560 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 RHPN2Q8IUC4 686 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 FBXO36Q8NEA4 188 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 DCAF4Q8WV16 495 aa19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 DGCR14Q96DF8 476 aaKnown RBP19.49■□□□□ 0.71
ECHDC1-214ENST00000474289 A0A088AWK7 358 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 SGK1O00141 431 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 ATP6V1G1O75348 118 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 PEX2P28328 305 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 VCPP55072 806 aaKnown RBP19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 PDE1BQ01064 536 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 SNRNP35Q16560 246 aaKnown RBP19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 FAM98CQ17RN3 349 aaKnown RBP19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 FBXL13Q8NEE6 735 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 ZNF526Q8TF50 670 aaPredicted RBP19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 SLITRK1Q96PX8 696 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 C11orf70Q9BRQ4 267 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 PCDH9Q9HC56 1237 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 RAB20Q9NX57 234 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 NDUFA13Q9P0J0 144 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 ADAMTS6Q9UKP5 1117 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 PCDHGA4Q9Y5G9 962 aa19.48■□□□□ 0.71
ECHDC1-214ENST00000474289 MEI4A8MW99 385 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 KLF11O14901 512 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 VILLO15195 856 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 SCNN1DP51172 638 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 MAMLD1Q13495 774 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 ITGA9Q13797 1035 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 PDK3Q15120 406 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 PADI6Q6TGC4 694 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 SH2D5Q6ZV89 423 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 ARID3BQ8IVW6 561 aaPredicted RBP19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 ZFPM1Q8IX07 1006 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 KLHL4Q9C0H6 718 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 TMEM8AQ9HCN3 771 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 BLOC1S6Q9UL45 172 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 DRG1Q9Y295 367 aaKnown RBP19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 ZNF536O15090 1300 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 PRR5-ARHGAP8B1AHC4 643 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 RIMBP2O15034 1052 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 SMIM18P0DKX4 95 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 CHN2P52757 468 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 ARHGAP8P85298 464 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 MMEL1Q495T6 779 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 TMEM259Q4ZIN3 620 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 CIAPIN1Q6FI81 312 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 UGT2A3Q6UWM9 527 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 CERS5Q8N5B7 392 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 LZICQ8WZA0 190 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 PI4K2AQ9BTU6 479 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 CCDC106Q9BWC9 280 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms