RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TCHHQ07283 1943 aa11.96□□□□□ -0.5
CKS1B-206ENST00000474215 KMT2EQ8IZD2 1858 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 SLC38A8A6NNN8 435 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF263O14978 683 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 AKAP3O75969 853 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 SMC2O95347 1197 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 VNN1O95497 513 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 F11P03951 625 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
CKS1B-206ENST00000474215 WEE1P30291 646 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 GDI1P31150 447 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 PSMC2P35998 433 aaKnown RBP11.95□□□□□ -0.5
CKS1B-206ENST00000474215 VAMP7P51809 220 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 CYP4F8P98187 520 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 CYP27A1Q02318 531 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ADAM9Q13443 819 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF699Q32M78 642 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ZACNQ401N2 412 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ZCWPW2Q504Y3 356 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF667Q5HYK9 610 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 SDHAF4Q5VUM1 108 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 SV2AQ7L0J3 742 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 TMEM150AQ86TG1 271 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 SCN4BQ8IWT1 228 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 PJA1Q8NG27 643 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ATOH1Q92858 354 aaPredicted RBP11.95□□□□□ -0.5
CKS1B-206ENST00000474215 DNASE1L2Q92874 299 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 RSPRY1Q96DX4 576 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 MYRFLQ96LU7 910 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 NELL2Q99435 816 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 SLC46A2Q9BY10 475 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 FOXQ1Q9C009 403 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 TRPV5Q9NQA5 729 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 ZMYM5Q9UJ78 669 aa11.95□□□□□ -0.5
CKS1B-206ENST00000474215 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
CKS1B-206ENST00000474215 MAGED2Q9UNF1 606 aaPredicted RBP11.95□□□□□ -0.5
CKS1B-206ENST00000474215 FAM170BA6NMN3 283 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 SOBPA7XYQ1 873 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 A8MXQ7 604 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 DPYSL4O14531 572 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 NOL4O94818 638 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 DCNP07585 359 aaKnown RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 KRT13P13646 458 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 CD72P21854 359 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 BDNFP23560 247 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 CDH8P55286 799 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 ENPEPQ07075 957 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 FCHO2Q0JRZ9 810 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 MDH1BQ5I0G3 518 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 C1orf220Q5T0J3 134 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF658Q5TYW1 1059 aaPredicted RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 VSTM1Q6UX27 236 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF852Q6ZMS4 543 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 YAF2Q8IY57 180 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 FAM186BQ8IYM0 893 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 SMYD4Q8IYR2 804 aaPredicted RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 CMTM8Q8IZV2 173 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 SPATA20Q8TB22 786 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 TAF4BQ92750 862 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 MYLPFQ96A32 169 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 PCED1BQ96HM7 432 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 SPATA17Q96L03 361 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 CEP295NLQ96MC4 621 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 OSBPL6Q9BZF3 934 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 HEBP1Q9NRV9 189 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 OBP2AQ9NY56 170 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 DLGAP2Q9P1A6 1054 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 UXTQ9UBK9 157 aaPredicted RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 MTF2Q9Y483 593 aaPredicted RBP11.94□□□□□ -0.5
CKS1B-206ENST00000474215 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
CKS1B-206ENST00000474215 NCANO14594 1321 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 CHADO15335 359 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 CLSTN1O94985 981 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 P4HA1P13674 534 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 GLULP15104 373 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 DDX6P26196 483 aaKnown RBP eCLIP11.93□□□□□ -0.52e-10■■■□□ 16
CKS1B-206ENST00000474215 GRIK1P39086 918 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 PRCPP42785 496 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 MCCD1P59942 119 aaPredicted RBP11.93□□□□□ -0.5
CKS1B-206ENST00000474215 UBXN2BQ14CS0 331 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 COBLL1Q53SF7 1204 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 TPRG1Q6ZUI0 275 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 ALYREFQ86V81 257 aaKnown RBP11.93□□□□□ -0.5
CKS1B-206ENST00000474215 MON1AQ86VX9 555 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 ELOA2Q8IYF1 753 aaPredicted RBP11.93□□□□□ -0.5
CKS1B-206ENST00000474215 CELF5Q8N6W0 485 aaKnown RBP11.93□□□□□ -0.5
CKS1B-206ENST00000474215 MAB21L3Q8N8X9 362 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 MRPS31Q92665 395 aaKnown RBP11.93□□□□□ -0.5
CKS1B-206ENST00000474215 ELMO3Q96BJ8 720 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 LRRC3BQ96PB8 259 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 DPEP3Q9H4B8 488 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms