RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PDGFRBP09619 1106 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 PNMA6AP0CW24 399 aaPredicted RBP8.09□□□□□ -1.11
CCDC93-207ENST00000474006 ODC1P11926 461 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CD58P19256 250 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TYMPP19971 482 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 KRT9P35527 623 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 SOX5P35711 763 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 STAT1P42224 750 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 NDST1P52848 882 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 JAM2P57087 298 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 YWHAEP62258 255 aaKnown RBP8.09□□□□□ -1.11
CCDC93-207ENST00000474006 ZBED6P86452 979 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 PLCB3Q01970 1234 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 KRT17Q04695 432 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TRIM14Q14142 442 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 FUT10Q6P4F1 479 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TMEM270Q6UE05 265 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CCDC186Q7Z3E2 898 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 DDX53Q86TM3 631 aaKnown RBP8.09□□□□□ -1.11
CCDC93-207ENST00000474006 OSTM1Q86WC4 334 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 METTL23Q86XA0 190 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CEP57Q86XR8 500 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 FAM71AQ8IYT1 594 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 ADGRF2Q8IZF7 708 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TMEM86AQ8N2M4 240 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 UBR7Q8N806 425 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 OR8K1Q8NGG5 319 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 OR6B3Q8NGW1 331 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 KBTBD7Q8WVZ9 684 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 SHC3Q92529 594 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 ITPKCQ96DU7 683 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 TMEM169Q96HH4 297 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 B3GALT6Q96L58 329 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 SPAG5Q96R06 1193 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 C17orf80Q9BSJ5 609 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 VN1R3Q9BXE9 311 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 AIPL1Q9NZN9 384 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 DSEQ9UL01 958 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 MYO6Q9UM54 1294 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 BARX2Q9UMQ3 279 aaPredicted RBP8.09□□□□□ -1.11
CCDC93-207ENST00000474006 CNTN6Q9UQ52 1028 aa8.09□□□□□ -1.11
CCDC93-207ENST00000474006 SF3B1O75533 1304 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ARHGEF37A1IGU5 675 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 LRRC53A6NM62 1247 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 A8MXQ7 604 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 F8VZ95 297 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 J3QL48 77 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 SYN3O14994 580 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 HCRTO43612 131 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 CILPO75339 1184 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 GFPT2O94808 682 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 OAZ2O95190 189 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ZIC2O95409 532 aaPredicted RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 CALCAP01258 141 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 RB1P06400 928 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 KRT5P13647 590 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 FGFR3P22607 806 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 WARSP23381 471 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TKTP29401 623 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 CTNNB1P35222 781 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 PPM1AP35813 382 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 PTGIRP43119 386 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 LHX1P48742 406 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 RAD23BP54727 409 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 WDR4P57081 412 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ERVK-21P61565 698 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TAP1Q03518 808 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ARID5AQ03989 594 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 INCA1Q0VD86 236 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ELAVL2Q12926 359 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 CBLBQ13191 982 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ORC1Q13415 861 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 USP41Q3LFD5 358 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 SFMBT2Q5VUG0 894 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 KIAA0319Q5VV43 1072 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 OVOS1Q6IE37 1185 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 PDXDC1Q6P996 788 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 SPRED2Q7Z698 418 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 UNC93AQ86WB7 457 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 CRYBG2Q8N1P7 616 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 THEM5Q8N1Q8 247 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TTC39CQ8N584 583 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TC2NQ8N9U0 490 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 LNX1Q8TBB1 728 aaPredicted RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 SYN2Q92777 582 aaPredicted RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TMEM176AQ96HP8 235 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 PDLIM2Q96JY6 352 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 HEXIM2Q96MH2 286 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TWNKQ96RR1 684 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TGS1Q96RS0 853 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 RTP3Q9BQQ7 232 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 TTPALQ9BTX7 342 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 PLVAPQ9BX97 442 aa8.08□□□□□ -1.12
CCDC93-207ENST00000474006 NUCKS1Q9H1E3 243 aaKnown RBP8.08□□□□□ -1.12
CCDC93-207ENST00000474006 NKX2-4Q9H2Z4 354 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms