RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 PCSK1P29120 753 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 HOXD13P35453 343 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 CXCL12P48061 93 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 LHX1P48742 406 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 NRLP54845 237 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 RPL10AP62906 217 aaKnown RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 CYP27A1Q02318 531 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 GAS6Q14393 721 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 SURF1Q15526 300 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 TMEM150AQ86TG1 271 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 RALGPS2Q86X27 583 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 GRAMD1CQ8IYS0 662 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 TOP6BLQ8N6T0 577 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 ZBTB44Q8NCP5 570 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 CXorf38Q8TB03 319 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 RMDN1Q96DB5 314 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 FNBP1Q96RU3 617 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 OBP2AQ9NY56 170 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 RAB23Q9ULC3 237 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 CEP192Q8TEP8 1941 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 DCHS1Q96JQ0 3298 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 NUP205Q92621 2012 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 BDNFP23560 247 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 FNTBP49356 437 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 DMWDQ09019 674 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 PKP1Q13835 747 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
SMPD4-217ENST00000473720 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 CC2D1AQ6P1N0 951 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-217ENST00000473720 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 LEO1Q8WVC0 666 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-217ENST00000473720 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-217ENST00000473720 SNX21Q969T3 373 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 MSANTD3Q96H12 275 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 CYP2S1Q96SQ9 504 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 C7orf25Q9BPX7 421 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 AGPAT3Q9NRZ7 376 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 TDP1Q9NUW8 608 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 MAGEC2Q9UBF1 373 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-217ENST00000473720 UXTQ9UBK9 157 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-217ENST00000473720 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 PCDHA7Q9UN72 937 aa12.8□□□□□ -0.36
SMPD4-217ENST00000473720 DMXL1Q9Y485 3027 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 TGFB1I1O43294 461 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 LILRB5O75023 590 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 TADA3O75528 432 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 CST3P01034 146 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-217ENST00000473720 ARSAP15289 507 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 DDX6P26196 483 aaKnown RBP eCLIP12.79□□□□□ -0.362e-8■■■■■ 34.9
SMPD4-217ENST00000473720 HOXC13P31276 330 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 GRIK1P39086 918 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 DNM1Q05193 864 aaKnown RBP12.79□□□□□ -0.36
SMPD4-217ENST00000473720 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-217ENST00000473720 SRSF5Q13243 272 aaKnown RBP12.79□□□□□ -0.36
SMPD4-217ENST00000473720 CUL4BQ13620 913 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 RUNX3Q13761 415 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 DGKKQ5KSL6 1271 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 C1orf228Q6PIY5 440 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 C4orf50Q6ZRC1 276 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 EPM2AIP1Q7L775 607 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-217ENST00000473720 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 WDR49Q8IV35 697 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 SPEM1Q8N4L4 309 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 RIN3Q8TB24 985 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 KBTBD7Q8WVZ9 684 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 MYLPFQ96A32 169 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 PKMYT1Q99640 499 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 FAM126AQ9BYI3 521 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-217ENST00000473720 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 SNX25Q9H3E2 840 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 KIAA1586Q9HCI6 787 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 SERTAD1Q9UHV2 236 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 GMEB2Q9UKD1 530 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 FRYLO94915 3013 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 GVINP1Q7Z2Y8 2422 aa12.79□□□□□ -0.36
SMPD4-217ENST00000473720 C2orf78A6NCI8 922 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 OTOL1A6NHN0 477 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-217ENST00000473720 GABRDO14764 452 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 PHACTR2O75167 634 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 ABL1P00519 1130 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 CKMP06732 381 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 TDGF1P13385 188 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 ANXA13P27216 316 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 WEE1P30291 646 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms