RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SNX9Q9Y5X1 595 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 ANAPC1Q9H1A4 1944 aa19.33■□□□□ 0.69
SNX4-204ENST00000473417 SPTBN4Q9H254 2564 aa19.33■□□□□ 0.69
SNX4-204ENST00000473417 BICDL2A1A5D9 508 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 C4BPAP04003 597 aaKnown RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 PSMC3P17980 439 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 ATF6P18850 670 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 UBXN2BQ14CS0 331 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 TDRD10Q5VZ19 366 aaKnown RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 TTI2Q6NXR4 508 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 DNAJB7Q7Z6W7 309 aaPredicted RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 SPPL2BQ8TCT7 592 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 C2orf15Q8WU43 125 aaKnown RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 TRMT61BQ9BVS5 477 aaKnown RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 MMRN2Q9H8L6 949 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 BRD9Q9H8M2 597 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 ZNF334Q9HCZ1 680 aaPredicted RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 HEBP1Q9NRV9 189 aa19.33■□□□□ 0.68
SNX4-204ENST00000473417 MTF2Q9Y483 593 aaPredicted RBP19.33■□□□□ 0.68
SNX4-204ENST00000473417 F5P12259 2224 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 HELZP42694 1942 aaKnown RBP19.32■□□□□ 0.68
SNX4-204ENST00000473417 SHISA7A6NL88 538 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 IKBKBO14920 756 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 CD72P21854 359 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 VIPR2P41587 438 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 TUFMP49411 452 aaKnown RBP19.32■□□□□ 0.68
SNX4-204ENST00000473417 MYL6P60660 151 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 SMARCB1Q12824 385 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 STXBP5Q5T5C0 1151 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 GAREM2Q75VX8 874 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 SV2AQ7L0J3 742 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 ITIH5Q86UX2 942 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 LRRTM3Q86VH5 581 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 C1orf210Q8IVY1 113 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 SEPT5Q99719 369 aaPredicted RBP19.32■□□□□ 0.68
SNX4-204ENST00000473417 LPIN3Q9BQK8 851 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 SLITRK6Q9H5Y7 841 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 TRPV5Q9NQA5 729 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 GDAP2Q9NXN4 497 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 L1RE1Q9UN81 338 aa19.32■□□□□ 0.68
SNX4-204ENST00000473417 FAM170BA6NMN3 283 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 SLC16A3O15427 465 aaKnown RBP19.31■□□□□ 0.68
SNX4-204ENST00000473417 HUS1O60921 280 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 CLSTN1O94985 981 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 FGF19O95750 216 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 TARSP26639 723 aaKnown RBP19.31■□□□□ 0.68
SNX4-204ENST00000473417 GABRR2P28476 465 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 GDI1P31150 447 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 MAGEA9P43362 315 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 GCLMP48507 274 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 PPP3CAQ08209 521 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 NCOA4Q13772 614 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 MGAT5BQ3V5L5 792 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 ZACNQ401N2 412 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 MFSD6LQ8IWD5 586 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 PDCL2Q8N4E4 241 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 MLKLQ8NB16 471 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 IRF7Q92985 503 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 E2F7Q96AV8 911 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 CEP63Q96MT8 703 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 BCO2Q9BYV7 579 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 GVINP1Q7Z2Y8 2422 aa19.31■□□□□ 0.68
SNX4-204ENST00000473417 HEPACAM2A8MVW5 462 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 VNN1O95497 513 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 HAPLN1P10915 354 aaPredicted RBP19.3■□□□□ 0.68
SNX4-204ENST00000473417 CDR1P51861 262 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 NLRP12P59046 1061 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 ENPEPQ07075 957 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 VEPH1Q14D04 833 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 DPCR1Q3MIW9 517 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 WDR72Q3MJ13 1102 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 DCAF17Q5H9S7 520 aaPredicted RBP19.3■□□□□ 0.68
SNX4-204ENST00000473417 ZNF852Q6ZMS4 543 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 FILIP1Q7Z7B0 1213 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 DCP1BQ8IZD4 617 aaKnown RBP19.3■□□□□ 0.68
SNX4-204ENST00000473417 MAML2Q8IZL2 1156 aaPredicted RBP19.3■□□□□ 0.68
SNX4-204ENST00000473417 SYAP1Q96A49 352 aaPredicted RBP19.3■□□□□ 0.68
SNX4-204ENST00000473417 CLDN23Q96B33 292 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 ELMO3Q96BJ8 720 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 RSPRY1Q96DX4 576 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 MMS19Q96T76 1030 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 NELL2Q99435 816 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 IL21Q9HBE4 155 aa19.3■□□□□ 0.68
SNX4-204ENST00000473417 ABI2Q9NYB9 513 aaPredicted RBP19.3■□□□□ 0.68
SNX4-204ENST00000473417 ARNTLO00327 626 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 SP9P0CG40 484 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 ATICP31939 592 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 TSPY1Q01534 308 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 FCHO2Q0JRZ9 810 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 SOWAHAQ2M3V2 549 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 ZNF699Q32M78 642 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 CCDC40Q4G0X9 1142 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 TCERG1LQ5VWI1 586 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 FOXR2Q6PJQ5 311 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 ADGRF2Q8IZF7 708 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 TMEM86AQ8N2M4 240 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 TOP6BLQ8N6T0 577 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 SPATA18Q8TC71 538 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 FAM200AQ8TCP9 573 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 SRRTQ9BXP5 876 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms