RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MTERF2Q49AM1 385 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 HECTD3Q5T447 861 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 STYK1Q6J9G0 422 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 AAGABQ6PD74 315 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 DHDDSQ86SQ9 333 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 SPATA16Q9BXB7 569 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ANKZF1Q9H8Y5 726 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MAGED2Q9UNF1 606 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 M0QZ92 97 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 TLR2O60603 784 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 VAMP4O75379 141 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 KDM4BO94953 1096 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 CCNE2O96020 404 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 AKR1B1P15121 316 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 TSTA3Q13630 321 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 DGCR6Q14129 220 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 UGP2Q16851 508 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ARL6IP4Q66PJ3 421 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 SYCE2Q6PIF2 218 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ZNF280BQ86YH2 543 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MYO1HQ8N1T3 1032 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 TEX47Q8TBZ9 253 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GJA10Q969M2 543 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 RBM17Q96I25 401 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 NUP85Q9BW27 656 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 WNT8AQ9H1J5 351 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 CLK4Q9HAZ1 481 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 UCKL1Q9NWZ5 548 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MEI4A8MW99 385 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 PLOD3O60568 738 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 UQCRBP14927 111 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ZNF3P17036 446 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 PAMP19021 973 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ADSSP30520 456 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 PSMC2P35998 433 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 NT5C2P49902 561 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 SERPINB9P50453 376 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 CCNIQ14094 377 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GALNT18Q6P9A2 607 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GOLM1Q8NBJ4 401 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 APOL2Q9BQE5 337 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 BDH2Q9BUT1 245 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 TMEM120AQ9BXJ8 343 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 CCDC177Q9NQR7 707 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GMIPQ9P107 970 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 TBC1D14Q9P2M4 693 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 C15orf38-AP3S2A0A0A6YYH1 394 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 A0A1W2PQC6 194 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MDM4O15151 490 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ANPEPP15144 967 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 PSMA3P25788 255 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 RPL35P42766 123 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GEMIN4P57678 1058 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ARF3P61204 181 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 GPC5P78333 572 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ARF1P84077 181 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 AARS2Q5JTZ9 985 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ARPINQ7Z6K5 226 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 RASAL3Q86YV0 1011 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 VANGL1Q8TAA9 524 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 DLG3Q92796 817 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 TBC1D10AQ9BXI6 508 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 ISPDA4D126 451 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 TSPAN1O60635 241 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 CBX6O95503 412 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 ARL4AP40617 200 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 ENPEPQ07075 957 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 TFDP2Q14188 446 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 DDR2Q16832 855 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 PAGE2BQ5JRK9 111 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 SLCO6A1Q86UG4 719 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 CAMKK1Q8N5S9 505 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 MCFD2Q8NI22 146 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 MYLK2Q9H1R3 596 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 PCDHGB4Q9UN71 923 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 HTR3EA5X5Y0 456 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 OR52Z1P0C646 297 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 TFE3P19532 575 aaPredicted RBP9.31□□□□□ -0.92
COL6A3-210ENST00000473258 RPA1P27694 616 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 SEPHS1P49903 392 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 SLC5A3P53794 718 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 FOLH1Q04609 750 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 C1orf189Q5VU69 101 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 CRTC1Q6UUV9 634 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.31□□□□□ -0.92
COL6A3-210ENST00000473258 JAMLQ86YT9 394 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 FBXW8Q8N3Y1 598 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 ZNF713Q8N859 430 aaPredicted RBP9.31□□□□□ -0.92
COL6A3-210ENST00000473258 ULK4Q96C45 1275 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 PAGR1Q9BTK6 254 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 USP44Q9H0E7 712 aa9.31□□□□□ -0.92
COL6A3-210ENST00000473258 IL1RL2Q9HB29 575 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms