RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CYP2J2P51589 502 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 FKBP3Q00688 224 aaKnown RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 CAPSQ13938 189 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 UBXN2BQ14CS0 331 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 MLF2Q15773 248 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 SH3PXD2AQ5TCZ1 1133 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 TSSK4Q6SA08 328 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 PARM1Q6UWI2 310 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 APTXQ7Z2E3 356 aaKnown RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 IRF2BP1Q8IU81 584 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 ZC3H3Q8IXZ2 948 aaKnown RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 EXOC8Q8IYI6 725 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 TMEM161BQ8NDZ6 487 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 DEPTORQ8TB45 409 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 GOLGA5Q8TBA6 731 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 NETO1Q8TDF5 533 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 TCP11Q8WWU5 503 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 CLDN23Q96B33 292 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 TRIM44Q96DX7 344 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 BICD1Q96G01 975 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 SHDQ96IW2 340 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 ASB16Q96NS5 453 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 STRA6Q9BX79 667 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 ST6GALNAC4Q9H4F1 302 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 AGPAT3Q9NRZ7 376 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 FAM105AQ9NUU6 356 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 ARHGAP28Q9P2N2 729 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 EXOC7Q9UPT5 735 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 TRAF3IP3Q9Y228 551 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 CACNA1EQ15878 2313 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 AKAP13Q12802 2813 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 DMXL2Q8TDJ6 3036 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 IGKV6-21A0A0C4DH24 114 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 FAM170BA6NMN3 283 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TISP43B9A030 160 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 F8W810 466 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 NRP1O14786 923 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 HNRNPDLO14979 420 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 CETN3O15182 167 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 CLIC2O15247 247 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TGFB1I1O43294 461 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 GNA14O95837 355 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 URODP06132 367 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 SPATA31D3P0C874 917 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 EPB41P11171 864 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 CD72P21854 359 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 RPL13P26373 211 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TARSP26639 723 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TMOD1P28289 359 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PMLP29590 882 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 ABCD1P33897 745 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 MAGEA9P43362 315 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRR20EP86478 221 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRR20CP86479 221 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRR20DP86480 221 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRR20BP86481 221 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRR20AP86496 221 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 GTF2BQ00403 316 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRKCQQ04759 706 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 RNASELQ05823 741 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 LAMTOR4Q0VGL1 99 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 FZD5Q13467 585 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TFDP1Q14186 410 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 NFIL3Q16649 462 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 MAN2A1Q16706 1144 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 SLC44A4Q53GD3 710 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 CEP135Q66GS9 1140 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TWF2Q6IBS0 349 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 ARMCX5Q6P1M9 558 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 AGMOQ6ZNB7 445 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 SPATA31D4Q6ZUB0 917 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 FILIP1Q7Z7B0 1213 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 VSTM4Q8IW00 320 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 ZBTB8OSQ8IWT0 167 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 HDAC7Q8WUI4 952 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 SECISBP2LQ93073 1101 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 NLRP4Q96MN2 994 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 SCLT1Q96NL6 688 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TMEM175Q9BSA9 504 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TUBGCP2Q9BSJ2 902 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 GCOM2Q9BZD3 368 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 VPS16Q9H269 839 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TMEM206Q9H813 350 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 SUCLA2Q9P2R7 463 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 STK39Q9UEW8 545 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 GMEB2Q9UKD1 530 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TBX20Q9UMR3 447 aa6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PIN4Q9Y237 131 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 PRG3Q9Y2Y8 225 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 TDRD15B5MCY1 1934 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
HDAC1-205ENST00000472928 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 A0A087WZ62 844 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms