RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CCNJLQ8IV13 435 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 GMCL1P1Q8NEA9 526 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 PIP4K2CQ8TBX8 421 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 DDX12PQ92771 950 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 GFM2Q969S9 779 aaKnown RBP10.63□□□□□ -0.71
APTX-216ENST00000472896 UIMC1Q96RL1 719 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 CDC42EP4Q9H3Q1 356 aaKnown RBP10.63□□□□□ -0.71
APTX-216ENST00000472896 ERVK-5Q9HDB9 667 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 ARPP21Q9UBL0 812 aaPredicted RBP10.63□□□□□ -0.71
APTX-216ENST00000472896 ZFP69BQ9UJL9 534 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 ZNF232Q9UNY5 417 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
APTX-216ENST00000472896 NR2E1Q9Y466 385 aa10.63□□□□□ -0.71
APTX-216ENST00000472896 FAM47DPA6NHR8 397 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 CAPN9O14815 690 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 SLC26A4O43511 780 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 EDF1O60869 148 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 PFDN1O60925 122 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 CDH16O75309 829 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 ITIH2P19823 946 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 FOXN2P32314 431 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 RFC2P35250 354 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 JAM2P57087 298 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 NHLH1Q02575 133 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 SPARCL1Q14515 664 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 LEXMQ3ZCV2 418 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 FAM47CQ5HY64 1035 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 C11orf63Q6NUN7 778 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 ALDH16A1Q8IZ83 802 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 ZNF444Q8N0Y2 327 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 C12orf50Q8NA57 414 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 SLC30A5Q8TAD4 765 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 UHMK1Q8TAS1 419 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 SLC35G2Q8TBE7 412 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 C10orf82Q8WW14 230 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 NRG4Q8WWG1 115 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 SLCO2A1Q92959 643 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 PPP2R3CQ969Q6 453 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 ZNF653Q96CK0 615 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 CATSPER2Q96P56 530 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 PNMA5Q96PV4 448 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 SMC6Q96SB8 1091 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 BTBD10Q9BSF8 475 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 MTG1Q9BT17 334 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 UBE2ZQ9H832 354 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 TYW1Q9NV66 732 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 SSX2IPQ9Y2D8 614 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 FRMPD4Q14CM0 1322 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 F8W8V4 182 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 HAX1O00165 279 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 PRPF4O43172 522 aaKnown RBP eCLIP10.62□□□□□ -0.71
APTX-216ENST00000472896 ATP6V1G1O75348 118 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 TTC4O95801 387 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 FDX1P10109 184 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 IL9P15248 144 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 RPL13P26373 211 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 COILP38432 576 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 STAT1P42224 750 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 TECP42680 631 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 CLCN2P51788 898 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 INHBCP55103 352 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 USP46P62068 366 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 DEFB103AP81534 67 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 COASYQ13057 564 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 MPP2Q14168 576 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 STAT4Q14765 748 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 TKFCQ3LXA3 575 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 TMEM119Q4V9L6 283 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 FAM26FQ5R3K3 315 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 CCDC137Q6PK04 289 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 EPM2AIP1Q7L775 607 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 OTUD6AQ7L8S5 288 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 NEK8Q86SG6 692 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 PHLDB2Q86SQ0 1253 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 RHOT2Q8IXI1 618 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 PRELID2Q8N945 189 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 NAT14Q8WUY8 206 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 C18orf8Q96DM3 657 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 DDX27Q96GQ7 796 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 FBXL18Q96ME1 805 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 VTA1Q9NP79 307 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 ITGB1BP2Q9UKP3 347 aa10.62□□□□□ -0.71
APTX-216ENST00000472896 SMG5Q9UPR3 1016 aaKnown RBP10.62□□□□□ -0.71
APTX-216ENST00000472896 TRIP12Q14669 1992 aaPredicted RBP10.61□□□□□ -0.71
APTX-216ENST00000472896 LCTP09848 1927 aa10.61□□□□□ -0.71
APTX-216ENST00000472896 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
APTX-216ENST00000472896 GTPBP10A4D1E9 387 aaKnown RBP10.61□□□□□ -0.71
APTX-216ENST00000472896 GSC2O15499 205 aa10.61□□□□□ -0.71
APTX-216ENST00000472896 ASMTLO95671 621 aa10.61□□□□□ -0.71
APTX-216ENST00000472896 IDO1P14902 403 aa10.61□□□□□ -0.71
APTX-216ENST00000472896 KCNA5P22460 613 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms