RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 LRRN2O75325 713 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 HMGA1P17096 107 aaKnown RBP21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 CD72P21854 359 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 GNL1P36915 607 aaPredicted RBP21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 NUBP1P53384 320 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 STARD6P59095 220 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 RPL10AP62906 217 aaKnown RBP21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 FAM171BQ6P995 826 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 ARID3BQ8IVW6 561 aaPredicted RBP21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 CCDC105Q8IYK2 499 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 GUF1Q8N442 669 aaKnown RBP21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 MYLPFQ96A32 169 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 XYLT2Q9H1B5 865 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 TRPV4Q9HBA0 871 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 ABCB6Q9NP58 842 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 HEBP1Q9NRV9 189 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 SIT1Q9Y3P8 196 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 NME7Q9Y5B8 376 aa21.23■□□□□ 0.99
UBQLN4-203ENST00000472638 VNN1O95497 513 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 C4BPAP04003 597 aaKnown RBP21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 PSMC3P17980 439 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 NR2F2P24468 414 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 CDC25CP30307 473 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 AP3M2P53677 418 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 ZNF445P59923 1031 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 CYP27A1Q02318 531 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 PRKCQQ04759 706 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 NCOA4Q13772 614 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 MORC3Q14149 939 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 ZNF699Q32M78 642 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 SASS6Q6UVJ0 657 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 TPRG1Q6ZUI0 275 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 ALYREFQ86V81 257 aaKnown RBP21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 DTWD2Q8NBA8 298 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 TMEM174Q8WUU8 243 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 ATOH1Q92858 354 aaPredicted RBP21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 FUCA2Q9BTY2 467 aa21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 MAGEC2Q9UBF1 373 aaPredicted RBP21.22■□□□□ 0.99
UBQLN4-203ENST00000472638 SLC38A8A6NNN8 435 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 TACC1O75410 805 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 CSH1P0DML2 217 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 CSH2P0DML3 217 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 BDNFP23560 247 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 ATICP31939 592 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 RAP1GAPP47736 663 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 NLRP12P59046 1061 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 CLDN10P78369 228 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 UBXN2BQ14CS0 331 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 CFAP221Q4G0U5 840 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 MDH1BQ5I0G3 518 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 SCARA5Q6ZMJ2 495 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 C4orf50Q6ZRC1 276 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 MFSD6LQ8IWD5 586 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 YAF2Q8IY57 180 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 PJA1Q8NG27 643 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 TMC2Q8TDI7 906 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 DEPDC1BQ8WUY9 529 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 SMG9Q9H0W8 520 aaKnown RBP21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 DPEP3Q9H4B8 488 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 TASP1Q9H6P5 420 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 SMYD3Q9H7B4 428 aa21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 MTF2Q9Y483 593 aaPredicted RBP21.21■□□□□ 0.99
UBQLN4-203ENST00000472638 KANSL1LA0AUZ9 987 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 DPYSL4O14531 572 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 ZNF263O14978 683 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 AKAP3O75969 853 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 PRAMEF12O95522 483 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 STAU1O95793 577 aaKnown RBP21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 F11P03951 625 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 CCDC192P0DO97 292 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 VAMP7P51809 220 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 CDH8P55286 799 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 TYRO3Q06418 890 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 STX1AQ16623 288 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 ZNF667Q5HYK9 610 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 C1orf220Q5T0J3 134 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 TMEM150AQ86TG1 271 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 DNASE1L2Q92874 299 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 FUBP3Q96I24 572 aaKnown RBP eCLIP21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 SLC46A2Q9BY10 475 aa21.2■□□□□ 0.98
UBQLN4-203ENST00000472638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■■■ 113.7
UBQLN4-203ENST00000472638 A8MXQ7 604 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 BIN1O00499 593 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 TRIM49P0CI25 452 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 TRIM49CP0CI26 452 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 ADAM9Q13443 819 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 MAPRE1Q15691 268 aaKnown RBP21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 ZNF658Q5TYW1 1059 aaPredicted RBP21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 SV2AQ7L0J3 742 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 FAM186BQ8IYM0 893 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 MAB21L3Q8N8X9 362 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 IRF7Q92985 503 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 E2F7Q96AV8 911 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 EEF2KMTQ96G04 330 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 PCED1BQ96HM7 432 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 LRRC3BQ96PB8 259 aa21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 DDX23Q9BUQ8 820 aaKnown RBP21.19■□□□□ 0.98
UBQLN4-203ENST00000472638 MMRN2Q9H8L6 949 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms