RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TNFAIP3P21580 790 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 IGFBP4P22692 258 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 ANXA13P27216 316 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 ADORA2BP29275 332 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 ADCY1Q08828 1119 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 ARHGAP17Q68EM7 881 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 CCDC149Q6ZUS6 474 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 RBM23Q86U06 439 aaKnown RBP17.88■□□□□ 0.45
CCM2-205ENST00000472223 SLC2A14Q8TDB8 520 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 SMARCD1Q96GM5 515 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 PCED1BQ96HM7 432 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 LRCH3Q96II8 777 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 TMEM209Q96SK2 561 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 DNAJC7Q99615 494 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 HNRNPABQ99729 332 aaKnown RBP17.88■□□□□ 0.45
CCM2-205ENST00000472223 TTYH1Q9H313 450 aaPredicted RBP17.88■□□□□ 0.45
CCM2-205ENST00000472223 CYP4F11Q9HBI6 524 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 HSFX1Q9UBD0 423 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 WDR27A2RRH5 827 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 SOX1O00570 391 aaPredicted RBP17.87■□□□□ 0.45
CCM2-205ENST00000472223 CCDC130P13994 396 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 BRD2P25440 801 aaKnown RBP17.87■□□□□ 0.45
CCM2-205ENST00000472223 GRIK1P39086 918 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 SNX16P57768 344 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 RPL10AP62906 217 aaKnown RBP17.87■□□□□ 0.45
CCM2-205ENST00000472223 CAMK1Q14012 370 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 GRIN2CQ14957 1233 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 MGAT5BQ3V5L5 792 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 PPP1R26Q5T8A7 1209 aaPredicted RBP17.87■□□□□ 0.45
CCM2-205ENST00000472223 LCLAT1Q6UWP7 414 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 VSTM1Q6UX27 236 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 RSPO2Q6UXX9 243 aaPredicted RBP17.87■□□□□ 0.45
CCM2-205ENST00000472223 RNF19BQ6ZMZ0 732 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 LRRTM3Q86VH5 581 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 FAM161BQ96MY7 647 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 NOX5Q96PH1 765 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 PANX2Q96RD6 677 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 B3GNT5Q9BYG0 378 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 TSPAN16Q9UKR8 245 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 NME7Q9Y5B8 376 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 MYH10P35580 1976 aa17.87■□□□□ 0.45
CCM2-205ENST00000472223 MTMR11A4FU01 709 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 M0QYV0 167 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 TRIM66O15016 1216 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 ADAM12O43184 909 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 AP1G2O75843 785 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 ABLIM3O94929 683 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 BDNFP23560 247 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 HNRNPH3P31942 346 aaKnown RBP17.86■□□□□ 0.45
CCM2-205ENST00000472223 PRKCIP41743 596 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 ALDH1A3P47895 512 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 NRIP1P48552 1158 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 BCAT1P54687 386 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 CDR2Q01850 454 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 CCDC173Q0VFZ6 552 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 PLD1Q13393 1074 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 GOLGA7BQ2TAP0 167 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 TAF3Q5VWG9 929 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 PPP1R2P3Q6NXS1 205 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 TRIM72Q6ZMU5 477 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 RTL10Q7L3V2 364 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 IRF2BP2Q7Z5L9 587 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 FAM35AQ86V20 835 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 SCN4BQ8IWT1 228 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 ANKRD52Q8NB46 1076 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 MSANTD4Q8NCY6 345 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 EPS8L1Q8TE68 723 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
CCM2-205ENST00000472223 AGPAT1Q99943 283 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCM2-205ENST00000472223 PLEKHA4Q9H4M7 779 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 HAUS4Q9H6D7 363 aa17.86■□□□□ 0.45
CCM2-205ENST00000472223 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCM2-205ENST00000472223 COL4A4P53420 1690 aaPredicted RBP17.86■□□□□ 0.45
CCM2-205ENST00000472223 O00370 1275 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 PER2O15055 1255 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 TGM5O43548 720 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 NCK2O43639 380 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 CLASP2O75122 1294 aaKnown RBP17.85■□□□□ 0.45
CCM2-205ENST00000472223 MAGEA11P43364 429 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 BST2Q10589 180 aaKnown RBP17.85■□□□□ 0.45
CCM2-205ENST00000472223 DUSP4Q13115 394 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 VEPH1Q14D04 833 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 TAF12Q16514 161 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 MEA1Q16626 185 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 CCDC186Q7Z3E2 898 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 NOP9Q86U38 636 aaKnown RBP17.85■□□□□ 0.45
CCM2-205ENST00000472223 GPIHBP1Q8IV16 184 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 FUKQ8N0W3 1084 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 ELMOD1Q8N336 334 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 ATAD1Q8NBU5 361 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 TMEM35BQ8NCS4 154 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 KREMEN2Q8NCW0 462 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 HDAC7Q8WUI4 952 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 TFAP2BQ92481 460 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 CCDC42Q96M95 316 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 PKMYT1Q99640 499 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms