RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ZNF217O75362 1048 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 VNN2O95498 520 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 KCNE1P15382 129 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 ATP2B1P20020 1258 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 GRM5P41594 1212 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 EFNA5P52803 228 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
CDHR3-209ENST00000472116 INF2Q27J81 1249 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 OVOS1Q6IE37 1185 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 IL27RAQ6UWB1 636 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
CDHR3-209ENST00000472116 SLFN12Q8IYM2 578 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 TTC12Q9H892 705 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-209ENST00000472116 KCNMB3Q9NPA1 279 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 TM7SF3Q9NS93 570 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 USP20Q9Y2K6 914 aa11.13□□□□□ -0.63
CDHR3-209ENST00000472116 TMEM131Q92545 1883 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 M0QZQ0 153 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 SGK1O00141 431 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 SLITRK3O94933 977 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 LYPLA2O95372 231 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 APODP05090 189 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 CKMP06732 381 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 ZNF883P0CG24 379 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 C6P13671 934 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 HNRNPLP14866 589 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDHR3-209ENST00000472116 NMT1P30419 496 aaKnown RBP11.12□□□□□ -0.63
CDHR3-209ENST00000472116 MATKP42679 507 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 NAMPTP43490 491 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 NLRP12P59046 1061 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 EML3Q32P44 896 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 TXNDC8Q6A555 127 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 MON1AQ86VX9 555 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 TMPRSS12Q86WS5 348 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 EFCAB13Q8IY85 973 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 IL17RCQ8NAC3 791 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 FOXJ1Q92949 421 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 IFT74Q96LB3 600 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 EIF2AK1Q9BQI3 630 aaKnown RBP11.12□□□□□ -0.63
CDHR3-209ENST00000472116 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
CDHR3-209ENST00000472116 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
CDHR3-209ENST00000472116 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.12□□□□□ -0.63
CDHR3-209ENST00000472116 COL5A1P20908 1838 aaPredicted RBP11.12□□□□□ -0.63
CDHR3-209ENST00000472116 AHCTF1Q8WYP5 2266 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 A0A1B0GTW7 788 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 MEI4A8MW99 385 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 CCNT1O60563 726 aaKnown RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 DKK1O94907 266 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 USP17L7P0C7H9 530 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 JUPP14923 745 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 ATF6P18850 670 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 SCRN1Q12765 414 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 SMAD1Q15797 465 aaKnown RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 ALKAL1Q6UXT8 129 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 PRICKLE2Q7Z3G6 844 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TRMT11Q7Z4G4 463 aaKnown RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 NEK8Q86SG6 692 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 SLC41A1Q8IVJ1 513 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 CEP120Q8N960 986 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 PIGOQ8TEQ8 1089 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 ZMAT2Q96NC0 199 aaKnown RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 PNKPQ96T60 521 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TRPC7Q9HCX4 862 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TOR4AQ9NXH8 423 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 UXTQ9UBK9 157 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 MAGED2Q9UNF1 606 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-209ENST00000472116 TNFSF13BQ9Y275 285 aa11.11□□□□□ -0.63
CDHR3-209ENST00000472116 ATMQ13315 3056 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 MYH10P35580 1976 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 TNFSF14O43557 240 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 TLX3O43711 291 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-209ENST00000472116 LARGE1O95461 756 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 XRCC6P12956 609 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDHR3-209ENST00000472116 OPRD1P41143 372 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 ZNF77Q15935 545 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 SLC39A12Q504Y0 691 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 BROXQ5VW32 411 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 GALNT17Q6IS24 598 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 PCSK4Q6UW60 755 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 DHRS13Q6UX07 377 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 FMNL3Q8IVF7 1028 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 SNIP1Q8TAD8 396 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms