RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 RNF25Q96BH1 459 aaPredicted RBP18.32■□□□□ 0.52
RRP1-202ENST00000471909 MIEF2Q96C03 454 aa18.32■□□□□ 0.52
RRP1-202ENST00000471909 INTS9Q9NV88 658 aaKnown RBP18.32■□□□□ 0.52
RRP1-202ENST00000471909 SLC12A4Q9UP95 1085 aa18.32■□□□□ 0.52
RRP1-202ENST00000471909 CILPO75339 1184 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 ZNF410Q86VK4 478 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 LRRC34Q8IZ02 419 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 ACAP3Q96P50 834 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 ELOVL4Q9GZR5 314 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 CPA4Q9UI42 421 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 AGAP1Q9UPQ3 857 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 PI4K2BG5E9Z4 385 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 DYNC1LI2O43237 492 aaPredicted RBP18.31■□□□□ 0.52
RRP1-202ENST00000471909 MED7O43513 233 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
RRP1-202ENST00000471909 TMEM62Q0P6H9 643 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 FAM118BQ9BPY3 351 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 ADAM7Q9H2U9 754 aa18.31■□□□□ 0.52
RRP1-202ENST00000471909 MTRF1LQ9UGC7 380 aaKnown RBP18.31■□□□□ 0.52
RRP1-202ENST00000471909 CLNS1AP54105 237 aaKnown RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 TAP1Q03518 808 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 PTPN11Q06124 597 aaPredicted RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 ADCY2Q08462 1091 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 SF3A3Q12874 501 aaKnown RBP eCLIP18.3■□□□□ 0.526e-9■■■■■ 59.3
RRP1-202ENST00000471909 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 CROCCP2Q86T23 111 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 TBC1D31Q96DN5 1066 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 ADPGKQ9BRR6 497 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 NSRP1Q9H0G5 558 aaKnown RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 ADAMTS10Q9H324 1103 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 GINS2Q9Y248 185 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 C2CD2Q9Y426 696 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 AGTP01019 485 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 SLC29A2Q14542 456 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 LRRC38Q5VT99 294 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 TXNRD3NBQ6F5E7 133 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 ATL2Q8NHH9 583 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 ELAC2Q9BQ52 826 aaKnown RBP18.3■□□□□ 0.52
RRP1-202ENST00000471909 CXCL16Q9H2A7 254 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 SEMA4AQ9H3S1 761 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 RRAGCQ9HB90 399 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 DPP3Q9NY33 737 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
RRP1-202ENST00000471909 A6NJR5 290 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 IVDP26440 423 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 GBP2P32456 591 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 RFC1P35251 1148 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 IFI35P80217 286 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 PTK6Q13882 451 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 PIGHQ14442 188 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 TRIP13Q15645 432 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 CCNG2Q16589 344 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 UBAP2Q5T6F2 1119 aaKnown RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 CHADLQ6NUI6 762 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 RCOR2Q8IZ40 523 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 SLITRK1Q96PX8 696 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 CPXM1Q96SM3 734 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 PRMT1Q99873 361 aaKnown RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 CDHR5Q9HBB8 845 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 WHRNQ9P202 907 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 ASIC3Q9UHC3 531 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 ITGA11Q9UKX5 1188 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 CFAP73A6NFT4 308 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 GOLGA8SH3BPF8 625 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 KRT10P13645 584 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 GRM5P41594 1212 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 CALCOCO2Q13137 446 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 CRYMQ14894 314 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 MORN1Q5T089 497 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 CST9Q5W186 159 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 TLDC1Q6P9B6 456 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 MFSD7Q6UXD7 560 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 SYDE1Q6ZW31 735 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 TRPM8Q7Z2W7 1104 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 NIPA2Q8N8Q9 360 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 GRK7Q8WTQ7 553 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 STMN4Q9H169 189 aaPredicted RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 HOMER3Q9NSC5 361 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 GNEQ9Y223 722 aaKnown RBP18.29■□□□□ 0.52
RRP1-202ENST00000471909 NEU2Q9Y3R4 380 aa18.29■□□□□ 0.52
RRP1-202ENST00000471909 GPR32O75388 356 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 P4HA1P13674 534 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 JOSD2Q8TAC2 188 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 LENG1Q96BZ8 264 aaPredicted RBP18.28■□□□□ 0.52
RRP1-202ENST00000471909 KIF12Q96FN5 646 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 RBM41Q96IZ5 413 aaKnown RBP18.28■□□□□ 0.52
RRP1-202ENST00000471909 CCDC134Q9H6E4 229 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 SLC5A4Q9NY91 659 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 FLRT1Q9NZU1 646 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 SIGLEC16A6NMB1 481 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 MICAL2O94851 1124 aa18.28■□□□□ 0.52
RRP1-202ENST00000471909 NPTXRO95502 500 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms