RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 LMO3Q8TAP4 145 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 ITFG1Q8TB96 612 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 FAM200AQ8TCP9 573 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 NT5C1BQ96P26 610 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 MYADMQ96S97 322 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 NT5C1AQ9BXI3 368 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 LRRC3Q9BY71 257 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 CDH7Q9ULB5 785 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 ATP8B3O60423 1300 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 CSH1P0DML2 217 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 CSH2P0DML3 217 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 LAMP2P13473 410 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 BDNFP23560 247 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 CDR1P51861 262 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
SDC3-203ENST00000471567 TYRO3Q06418 890 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 CUL2Q13617 745 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 TAF12Q16514 161 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 MAN2A1Q16706 1144 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 SLC5A9Q2M3M2 681 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.2
SDC3-203ENST00000471567 ACOT1Q86TX2 421 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 TMC8Q8IU68 726 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 FGF13Q92913 245 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 SPATA17Q96L03 361 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 LPIN3Q9BQK8 851 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 B3GNT5Q9BYG0 378 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 ELOVL4Q9GZR5 314 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 CISHQ9NSE2 258 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 GDE1Q9NZC3 331 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 NFE2L3Q9Y4A8 694 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 NOTCH4Q99466 2003 aa16.27■□□□□ 0.2
SDC3-203ENST00000471567 GTPBP10A4D1E9 387 aaKnown RBP16.26■□□□□ 0.19
SDC3-203ENST00000471567 TRIM66O15016 1216 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 MYL4P12829 197 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 CD58P19256 250 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
SDC3-203ENST00000471567 GRIK1P39086 918 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 DDR2Q16832 855 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 SCN4BQ8IWT1 228 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 GIPC2Q8TF65 315 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 NXPE3Q969Y0 559 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 C8orf48Q96LL4 319 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 GPR88Q9GZN0 384 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
SDC3-203ENST00000471567 SAMSN1Q9NSI8 373 aaKnown RBP16.26■□□□□ 0.19
SDC3-203ENST00000471567 IGSF9Q9P2J2 1179 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 LIMD1Q9UGP4 676 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
SDC3-203ENST00000471567 KCNJ18B7U540 433 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 NOL4O94818 638 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 HMGA1P17096 107 aaKnown RBP16.25■□□□□ 0.19
SDC3-203ENST00000471567 ANXA13P27216 316 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 CCR2P41597 374 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 GPR15P49685 360 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 MYL5Q02045 173 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 LRMPQ12912 555 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 KCNJ12Q14500 433 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 TCP11X2Q5H9J9 407 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 TCEAL4Q96EI5 215 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 TRMT2BQ96GJ1 504 aaKnown RBP16.25■□□□□ 0.19
SDC3-203ENST00000471567 MYRFLQ96LU7 910 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 TWNKQ96RR1 684 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 ARID3AQ99856 593 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 TUBGCP2Q9BSJ2 902 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 ZNF518BQ9C0D4 1074 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 INTS2Q9H0H0 1204 aaKnown RBP16.25■□□□□ 0.19
SDC3-203ENST00000471567 UXTQ9UBK9 157 aaPredicted RBP16.25■□□□□ 0.19
SDC3-203ENST00000471567 DOCK8Q8NF50 2099 aa16.25■□□□□ 0.19
SDC3-203ENST00000471567 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 BDP1A6H8Y1 2624 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 SLC38A8A6NNN8 435 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 ANHXE9PGG2 379 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 CLDN5O00501 218 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 MOSPD3O75425 235 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 ALADP13716 330 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 CEBPBP17676 345 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 CDC25CP30307 473 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 GCNT1Q02742 428 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 ORC1Q13415 861 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 VWA3BQ502W6 1294 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 CDKAL1Q5VV42 579 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 PAQR9Q6ZVX9 377 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 FAM35AQ86V20 835 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 UBR7Q8N806 425 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 SHKBP1Q8TBC3 707 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 GPR152Q8TDT2 470 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 ING5Q8WYH8 240 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 JAKMIP2Q96AA8 810 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 SMARCD1Q96GM5 515 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 TMEM176AQ96HP8 235 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 FAM81BQ96LP2 452 aa16.24■□□□□ 0.19
SDC3-203ENST00000471567 HNRNPABQ99729 332 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms