RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 CHRM1P11229 460 aaPredicted RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 ACAT1P24752 427 aaKnown RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 CYP2F1P24903 491 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 LMO2P25791 158 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 NDUFA8P51970 172 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 ZXDBP98169 803 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 AMPD3Q01432 767 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 ZNF268Q14587 947 aaPredicted RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 VEPH1Q14D04 833 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 NFE2Q16621 373 aaPredicted RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 BMT2Q1RMZ1 405 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 SDHAF4Q5VUM1 108 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 LMBRD2Q68DH5 695 aaPredicted RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 NAIF1Q69YI7 327 aaPredicted RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 TXNDC8Q6A555 127 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 PKN3Q6P5Z2 889 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 C1orf228Q6PIY5 440 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 MON1AQ86VX9 555 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 METTL23Q86XA0 190 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 DCP1BQ8IZD4 617 aaKnown RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 ADGRF2Q8IZF7 708 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 THEM5Q8N1Q8 247 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 GPD1LQ8N335 351 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 CSGALNACT2Q8N6G5 542 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 CELF5Q8N6W0 485 aaKnown RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 PLEKHO2Q8TD55 490 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 SCFD1Q8WVM8 642 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 EZH1Q92800 747 aaPredicted RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 FUBP3Q96I24 572 aaKnown RBP eCLIP9.36□□□□□ -0.91
CHKB-206ENST00000471515 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 C7orf25Q9BPX7 421 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 PI4K2AQ9BTU6 479 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 LRRC27Q9C0I9 530 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 XYLT2Q9H1B5 865 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 GOLPH3LQ9H4A5 285 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 TMEM206Q9H813 350 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 PARD6AQ9NPB6 346 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 DDX43Q9NXZ2 648 aaKnown RBP9.36□□□□□ -0.91
CHKB-206ENST00000471515 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 GCNT4Q9P109 453 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 GTF3C4Q9UKN8 822 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 ANAPC1Q9H1A4 1944 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 SPTBN2O15020 2390 aa9.36□□□□□ -0.91
CHKB-206ENST00000471515 HRO43593 1189 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 KLRC4O43908 158 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 CSH1P0DML2 217 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 CSH2P0DML3 217 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 DDX6P26196 483 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHKB-206ENST00000471515 CASP1P29466 404 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 MAGEA11P43364 429 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 SYKP43405 635 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 CCR3P51677 355 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 RBP5P82980 135 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 BFSP1Q12934 665 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 USP4Q13107 963 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 PSMD6Q15008 389 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 ZNF77Q15935 545 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 DDR2Q16832 855 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 GAB4Q2WGN9 574 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 ARHGAP15Q53QZ3 475 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 TMEM196Q5HYL7 178 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 FSTL4Q6MZW2 842 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 DPH6Q7L8W6 267 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 WDR49Q8IV35 697 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 C12orf56Q8IXR9 622 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 CCDC65Q8IXS2 484 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 MAB21L3Q8N8X9 362 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 FSIP1Q8NA03 581 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 CACTINQ8WUQ7 758 aaKnown RBP9.35□□□□□ -0.91
CHKB-206ENST00000471515 TMEM174Q8WUU8 243 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 ATRIPQ8WXE1 791 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 ZNF516Q92618 1163 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 FBRSL1Q9HCM7 1045 aaKnown RBP9.35□□□□□ -0.91
CHKB-206ENST00000471515 GKN1Q9NS71 199 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 TDP1Q9NUW8 608 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 USP25Q9UHP3 1055 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 SNX9Q9Y5X1 595 aa9.35□□□□□ -0.91
CHKB-206ENST00000471515 UBE4BO95155 1302 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 MED19A0JLT2 244 aaPredicted RBP9.34□□□□□ -0.91
CHKB-206ENST00000471515 ZNF233A6NK53 670 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 TRDMT1O14717 391 aaKnown RBP9.34□□□□□ -0.91
CHKB-206ENST00000471515 HUS1O60921 280 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 PRPF40AO75400 957 aaKnown RBP9.34□□□□□ -0.91
CHKB-206ENST00000471515 ZNF202O95125 648 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
CHKB-206ENST00000471515 OLFM2O95897 454 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 CST3P01034 146 aaPredicted RBP9.34□□□□□ -0.91
CHKB-206ENST00000471515 ARSAP15289 507 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 TCF3P15923 654 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 WARSP23381 471 aaKnown RBP9.34□□□□□ -0.91
CHKB-206ENST00000471515 AFMP43652 599 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 CXCL12P48061 93 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 LHX1P48742 406 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 CACNA2D1P54289 1103 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 USP46P62068 366 aa9.34□□□□□ -0.91
CHKB-206ENST00000471515 CLDN10P78369 228 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms