RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CDC23Q9UJX2 597 aa9.73□□□□□ -0.85
PTPRE-207ENST00000471218 BARX2Q9UMQ3 279 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-207ENST00000471218 USP15Q9Y4E8 981 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-207ENST00000471218 PCDHB4Q9Y5E5 795 aa9.73□□□□□ -0.85
PTPRE-207ENST00000471218 PTPRZ1P23471 2315 aaPredicted RBP9.73□□□□□ -0.85
PTPRE-207ENST00000471218 CACNA1HO95180 2353 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 PIRO00625 290 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CILPO75339 1184 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 KIF4AO95239 1232 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CST3P01034 146 aaPredicted RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CYP1A2P05177 515 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 TUBBP07437 444 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 UNGP13051 313 aaPredicted RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 ITGA4P13612 1032 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CHRNB2P17787 502 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 POLR2BP30876 1174 aaKnown RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 USP8P40818 1118 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 NSFP46459 744 aaKnown RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 GALCP54803 685 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 SNX16P57768 344 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 OSTNP61366 133 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CKAP4Q07065 602 aaKnown RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 DUSP6Q16828 381 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 WDR72Q3MJ13 1102 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 C9orf57Q5W0N0 161 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 ACAD10Q6JQN1 1059 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 C11orf63Q6NUN7 778 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 TMEM270Q6UE05 265 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 SLFN11Q7Z7L1 901 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 RBM23Q86U06 439 aaKnown RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 SLC47A2Q86VL8 602 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
PTPRE-207ENST00000471218 ABI1Q8IZP0 508 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 TMEM86AQ8N2M4 240 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 SLC35F6Q8N357 371 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 TOP6BLQ8N6T0 577 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 CEP112Q8N8E3 955 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 OSBPL7Q9BZF2 842 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 STK39Q9UEW8 545 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 STRIP2Q9ULQ0 834 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 AGAP1Q9UPQ3 857 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 MRFAP1Q9Y605 127 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 SCINQ9Y6U3 715 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 TECTAO75443 2155 aa9.72□□□□□ -0.85
PTPRE-207ENST00000471218 MIF4GDA9UHW6 222 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 LINC01565O15544 149 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 CTIFO43310 598 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 FGF18O76093 207 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 SLU7O95391 586 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 FTLP02792 175 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 CALB1P05937 261 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 KRT19P08727 400 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 SETSIPP0DME0 302 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 FGFR4P22455 802 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 AVPR2P30518 371 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 TAF6P49848 677 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 FAM189BP81408 668 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 AMPD2Q01433 879 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 GRIK3Q13003 919 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 PAN2Q504Q3 1202 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 LIN9Q5TKA1 542 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF572Q7Z3I7 529 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF598Q86UK7 904 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 RTN4RL1Q86UN2 441 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 LRRC57Q8N9N7 239 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 TMEM35BQ8NCS4 154 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 SUSD6Q92537 303 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF592Q92610 1267 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 CASP10Q92851 521 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 ZMAT2Q96NC0 199 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 RPS6KC1Q96S38 1066 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 ARID3AQ99856 593 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.86
PTPRE-207ENST00000471218 CYLDQ9NQC7 956 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 TMEM161AQ9NX61 479 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 KANSL3Q9P2N6 904 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 SNX12Q9UMY4 172 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 HYOU1Q9Y4L1 999 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 SAR1BQ9Y6B6 198 aa9.71□□□□□ -0.86
PTPRE-207ENST00000471218 MACROD2A1Z1Q3 448 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 TBKBP1A7MCY6 615 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 EFCAB8A8MWE9 144 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 URI1O94763 535 aaPredicted RBP9.7□□□□□ -0.86
PTPRE-207ENST00000471218 THP07101 528 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 PNMA6AP0CW24 399 aaPredicted RBP9.7□□□□□ -0.86
PTPRE-207ENST00000471218 VDRP11473 427 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 DNAJB1P25685 340 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 AARSP49588 968 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPRE-207ENST00000471218 NOMO3P69849 1222 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 CNGA2Q16280 664 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 SPOPLQ6IQ16 392 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 TPCN2Q8NHX9 752 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 SLC20A1Q8WUM9 679 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF606Q8WXB4 792 aa9.7□□□□□ -0.86
PTPRE-207ENST00000471218 ATOH1Q92858 354 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms