RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 STAT4Q14765 748 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 SIX1Q15475 284 aaPredicted RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 TARBP2Q15633 366 aaKnown RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 EAPPQ56P03 285 aaPredicted RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 ERMARDQ5T6L9 678 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 ATF7IP2Q5U623 682 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 WDR78Q5VTH9 848 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 IZUMO3Q5VZ72 239 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 CDCA2Q69YH5 1023 aaPredicted RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 PCGF5Q86SE9 256 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 TTC39CQ8N584 583 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 RNF149Q8NC42 400 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 TRPM4Q8TD43 1214 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 RAPGEF5Q92565 580 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 CFAP57Q96MR6 1250 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 MMP19Q99542 508 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 CDC42EP4Q9H3Q1 356 aaKnown RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 SMARCAD1Q9H4L7 1026 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 RPF1Q9H9Y2 349 aaKnown RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 RAB6BQ9NRW1 208 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 CHORDC1Q9UHD1 332 aaPredicted RBP8.44□□□□□ -1.06
SMC4-212ENST00000470240 AGTPBP1Q9UPW5 1226 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 SNCAIPQ9Y6H5 919 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 ADGRA2Q96PE1 1338 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 CNTNAP2Q9UHC6 1331 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 LCTP09848 1927 aa8.44□□□□□ -1.06
SMC4-212ENST00000470240 PTPRFP10586 1907 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 DICER1Q9UPY3 1922 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 TCRBV7S2A1N4TA0A589 114 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 C5orf60A6NFR6 353 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 INO80B-WBP1J3KQ70 363 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 CDH16O75309 829 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 LGR5O75473 907 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 FSBPO95073 299 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ACSL3O95573 720 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 TTC4O95801 387 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SHBGP04278 402 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 VIMP08670 466 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 ABHD2P08910 425 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SRGAP2CP0DJJ0 459 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ATF7P17544 494 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 CD58P19256 250 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ATP4AP20648 1035 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 MMP8P22894 467 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 GPC1P35052 558 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 PTPN7P35236 360 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 MMP13P45452 471 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SEC24CP53992 1094 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SNX16P57768 344 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SP2Q02086 613 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 LAMTOR4Q0VGL1 99 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 IFT88Q13099 833 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 CLN3Q13286 438 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ITIH4Q14624 930 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 TTLL4Q14679 1199 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ZNF667Q5HYK9 610 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 PRAMEF18Q5VWM3 479 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SPOPLQ6IQ16 392 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 DRICH1Q6PGQ1 229 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 CRELD2Q6UXH1 353 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 PPP1R21Q6ZMI0 780 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ARHGEF18Q6ZSZ5 1173 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 TSHZ1Q6ZSZ6 1077 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 FASTKD5Q7L8L6 764 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 ERO1BQ86YB8 467 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ANKRD13AQ8IZ07 590 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 PHTF2Q8N3S3 785 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 EPS8L3Q8TE67 593 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 PRPF31Q8WWY3 499 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 ZNF606Q8WXB4 792 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ZBTB45Q96K62 511 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 MCEEQ96PE7 176 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 INO80BQ9C086 356 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 MTMR12Q9C0I1 747 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 SEMA4AQ9H3S1 761 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 MROH8Q9H579 483 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 FAM124BQ9H5Z6 455 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 CCDC134Q9H6E4 229 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 EFCC1Q9HA90 598 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 APOBEC3GQ9HC16 384 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 ADARB2Q9NS39 739 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 CHST7Q9NS84 486 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 CISHQ9NSE2 258 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 PRMT7Q9NVM4 692 aaPredicted RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 CPSF3Q9UKF6 684 aaKnown RBP8.43□□□□□ -1.06
SMC4-212ENST00000470240 ZNF148Q9UQR1 794 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 NUB1Q9Y5A7 615 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 CAPN7Q9Y6W3 813 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 UMODL1Q5DID0 1318 aa8.43□□□□□ -1.06
SMC4-212ENST00000470240 A0A0G2JLL6 359 aaPredicted RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 LRRD1A4D1F6 860 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 TMEM191CA6NGB0 347 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ACKR2O00590 384 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 MAGEB2O15479 319 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 B4GALT4O60513 344 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 MSCO60682 206 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms