RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
KDM3A-210ENST00000470160 PAK6Q9NQU5 681 aaPredicted RBP7.43□□□□□ -1.22
KDM3A-210ENST00000470160 EHD2Q9NZN4 543 aa7.43□□□□□ -1.22
KDM3A-210ENST00000470160 HMGXB4Q9UGU5 601 aa7.43□□□□□ -1.22
KDM3A-210ENST00000470160 LTBP2Q14767 1821 aa7.43□□□□□ -1.22
KDM3A-210ENST00000470160 GOLGA6L10A0A0M3HER8 536 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 M0QZQ0 153 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 KRIT1O00522 736 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 SPTLC1O15269 473 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 ATMINO43313 823 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 RAD51CO43502 376 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 CALCAP01258 141 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 FGGP02679 453 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 RHOXF2BP0C7M4 288 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 ITGA4P13612 1032 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 CD58P19256 250 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 RAP1GAPP47736 663 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 DUPD1Q68J44 220 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 DNAJC24Q6P3W2 148 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 C18orf25Q96B23 403 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 PPP1R16BQ96T49 567 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 RHOXF2Q9BQY4 288 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 AGO3Q9H9G7 860 aaKnown RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.42□□□□□ -1.223e-6■■□□□ 12.8
KDM3A-210ENST00000470160 PADI3Q9ULW8 664 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 NEU2Q9Y3R4 380 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 ARVCFO00192 962 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 DNM1LO00429 736 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 PPEF2O14830 753 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 SASH3O75995 380 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 INHAP05111 366 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 GLI1P08151 1106 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 ELNP15502 786 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 SSR1P43307 286 aaKnown RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 ACADSBP45954 432 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 MARCKSL1P49006 195 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 GUCY2FP51841 1108 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 OGDHQ02218 1023 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 SLC25A11Q02978 314 aaKnown RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 GRIK3Q13003 919 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 CD300LGQ6UXG3 332 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 CMASQ8NFW8 434 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 HDAC7Q8WUI4 952 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 CENPIQ92674 756 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 KHSRPQ92945 711 aaKnown RBP eCLIP7.42□□□□□ -1.223e-8■□□□□ 10.8
KDM3A-210ENST00000470160 RBM41Q96IZ5 413 aaKnown RBP7.42□□□□□ -1.22
KDM3A-210ENST00000470160 CPXM1Q96SM3 734 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 FTHL17Q9BXU8 183 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 TXLNGYQ9BZA5 131 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 FAM114A2Q9NRY5 505 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 TSPAN16Q9UKR8 245 aa7.42□□□□□ -1.22
KDM3A-210ENST00000470160 C3orf70A6NLC5 250 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 C2CD4BA6NLJ0 364 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 C9IYK1 514 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 SPOPO43791 374 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PARNO95453 639 aaKnown RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PTPN9P43378 593 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 ARSEP51690 589 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 ZNF143P52747 638 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PAK2Q13177 524 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 CCNG2Q16589 344 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 UPP1Q16831 310 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 TTC30AQ86WT1 665 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 CRIPAKQ8N1N5 446 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 RAET1EQ8TD07 263 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 TEKT4Q8WW24 435 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 GLT1D1Q96MS3 346 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 KRT12Q99456 494 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 TSPYL2Q9H2G4 693 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 SMARCAL1Q9NZC9 954 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 OGDHLQ9ULD0 1010 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 MTUS1Q9ULD2 1270 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 DRG1Q9Y295 367 aaKnown RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 HES2Q9Y543 173 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PLXNA3P51805 1871 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 A0A1W2PQ45 241 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 A0A1W2PQY0 241 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PITPNM1O00562 1244 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 THP07101 528 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 FGFR1P11362 822 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 CKBP12277 381 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 AKAP5P24588 427 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 GRK4P32298 578 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 HSPA9P38646 679 aaKnown RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 LHX1P48742 406 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 BCAT1P54687 386 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 TAS2R40P59535 323 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 RPL7AP62424 266 aaKnown RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 BST2Q10589 180 aaKnown RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 TWF2Q6IBS0 349 aaKnown RBP7.41□□□□□ -1.22
KDM3A-210ENST00000470160 OLFML1Q6UWY5 402 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 SCARA5Q6ZMJ2 495 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 BEND5Q7L4P6 421 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 SLC26A9Q7LBE3 791 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 ARFGAP1Q8N6T3 406 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 APPL2Q8NEU8 664 aa7.41□□□□□ -1.22
KDM3A-210ENST00000470160 PKMYT1Q99640 499 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms