RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 GPD1LQ8N335 351 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 TTC9BQ8N6N2 239 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 C1orf127Q8N9H9 656 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 ZNF397Q8NF99 534 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-208ENST00000469744 MCRS1Q96EZ8 462 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 KXD1Q9BQD3 176 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 DNAI1Q9UI46 699 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 CA14Q9ULX7 337 aa18.84■□□□□ 0.61
MRPL28-208ENST00000469744 ZFP37Q9Y6Q3 630 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-208ENST00000469744 EIF3DO15371 548 aaKnown RBP eCLIP18.83■□□□□ 0.6
MRPL28-208ENST00000469744 SOAT2O75908 522 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 HNRNPH3P31942 346 aaKnown RBP18.83■□□□□ 0.6
MRPL28-208ENST00000469744 CCR2P41597 374 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 DUSP4Q13115 394 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 GPR17Q13304 367 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 WSCD1Q658N2 575 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 TMEM105Q8N8V8 129 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 ATAD1Q8NBU5 361 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 GPR152Q8TDT2 470 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 ANKRD7Q92527 254 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 NXPE3Q969Y0 559 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 RTP3Q9BQQ7 232 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 MTMR12Q9C0I1 747 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 ZNHIT6Q9NWK9 470 aaKnown RBP18.83■□□□□ 0.6
MRPL28-208ENST00000469744 HSPBP1Q9NZL4 362 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 MYO1AQ9UBC5 1043 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 AGAP1Q9UPQ3 857 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 TRAF3IP3Q9Y228 551 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 SIK3Q9Y2K2 1263 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 SLC27A5Q9Y2P5 690 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 CACNA1HO95180 2353 aa18.83■□□□□ 0.6
MRPL28-208ENST00000469744 PTPRJQ12913 1337 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 MTMR11A4FU01 709 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 KRBA1A5PL33 1030 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 KPNA7A9QM74 516 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 CYP11A1P05108 521 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 SRFP11831 508 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 TRIM21P19474 475 aaKnown RBP18.82■□□□□ 0.6
MRPL28-208ENST00000469744 CASQ1P31415 396 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 NHLH1Q02575 133 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 SV2CQ496J9 727 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 PRSS36Q5K4E3 855 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 CWF19L1Q69YN2 538 aaKnown RBP18.82■□□□□ 0.6
MRPL28-208ENST00000469744 NT5DC4Q86YG4 428 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 CCDC170Q8IYT3 715 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 ELMOD1Q8N336 334 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 BORCS6Q96GS4 357 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 DESI2Q9BSY9 194 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 OXCT2Q9BYC2 517 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-208ENST00000469744 KCNH6Q9H252 994 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 EPN1Q9Y6I3 576 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-208ENST00000469744 UBE4BO95155 1302 aa18.82■□□□□ 0.6
MRPL28-208ENST00000469744 COL4A3Q01955 1670 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 PDXKO00764 312 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 CETN3O15182 167 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 CLIC2O15247 247 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 TGFB1I1O43294 461 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 CALUO43852 315 aaPredicted RBP18.81■□□□□ 0.6
MRPL28-208ENST00000469744 KRT19P08727 400 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 MYL4P12829 197 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 GJA1P17302 382 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 NPR3P17342 541 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 CYP2J2P51589 502 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 GNG11P61952 73 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 TUBB2AQ13885 445 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 MYBPC2Q14324 1141 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 KNOP1Q1ED39 458 aaKnown RBP18.81■□□□□ 0.6
MRPL28-208ENST00000469744 SLC39A12Q504Y0 691 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 ASTLQ6HA08 431 aaPredicted RBP18.81■□□□□ 0.6
MRPL28-208ENST00000469744 METTL23Q86XA0 190 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 RDH13Q8NBN7 331 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 OR5B17Q8NGF7 314 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 ZNF512Q96ME7 567 aaPredicted RBP18.81■□□□□ 0.6
MRPL28-208ENST00000469744 ZNF560Q96MR9 790 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 TUBB2BQ9BVA1 445 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 SIX4Q9UIU6 781 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 DSEQ9UL01 958 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 PIEZO1Q92508 2521 aa18.81■□□□□ 0.6
MRPL28-208ENST00000469744 ZNF233A6NK53 670 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 RRP9O43818 475 aaKnown RBP18.8■□□□□ 0.6
MRPL28-208ENST00000469744 TMEM191BP0C7N4 346 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 PAX3P23760 479 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 GPC5P78333 572 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 BFSP1Q12934 665 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 NFIL3Q16649 462 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 CCDC40Q4G0X9 1142 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 IQCEQ6IPM2 695 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 MTSS1LQ765P7 747 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 PDZD4Q76G19 769 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-208ENST00000469744 CXorf38Q8TB03 319 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 PCMTD1Q96MG8 357 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-208ENST00000469744 AVENQ9NQS1 362 aaPredicted RBP18.8■□□□□ 0.6
MRPL28-208ENST00000469744 MAFFQ9ULX9 164 aa18.8■□□□□ 0.6
MRPL28-208ENST00000469744 KIAA0391O15091 583 aaKnown RBP18.79■□□□□ 0.6
MRPL28-208ENST00000469744 PI15O43692 258 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 KIF5CO60282 957 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 NDUFA10O95299 355 aa18.79■□□□□ 0.6
MRPL28-208ENST00000469744 CYLC1P35663 651 aaPredicted RBP18.79■□□□□ 0.6
MRPL28-208ENST00000469744 TCF15Q12870 199 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms