RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 MCF2L2Q86YR7 1114 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 FOXP4Q8IVH2 680 aaPredicted RBP5.7□□□□□ -1.5
VPS8-219ENST00000469479 TSPYL6Q8N831 410 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 PCSK9Q8NBP7 692 aaKnown RBP5.7□□□□□ -1.5
VPS8-219ENST00000469479 OR5AN1Q8NGI8 311 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 ERCC4Q92889 916 aaPredicted RBP5.7□□□□□ -1.5
VPS8-219ENST00000469479 MYEOVQ96EZ4 313 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 FEZ1Q99689 392 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 UPF3BQ9BZI7 483 aaKnown RBP5.7□□□□□ -1.5
VPS8-219ENST00000469479 SPC25Q9HBM1 224 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 DDX4Q9NQI0 724 aaKnown RBP5.7□□□□□ -1.5
VPS8-219ENST00000469479 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.7□□□□□ -1.5
VPS8-219ENST00000469479 MAGEL2Q9UJ55 1249 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 MTCH2Q9Y6C9 303 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 WDFY4Q6ZS81 3184 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 IL16Q14005 1332 aa5.7□□□□□ -1.5
VPS8-219ENST00000469479 ZFHX2Q9C0A1 2572 aaPredicted RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 SPTBN4Q9H254 2564 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 SLC12A8A0AV02 714 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 DAPK3O43293 454 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 SCAF4O95104 1147 aaKnown RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 CSF2RAP15509 400 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 CST5P28325 142 aaPredicted RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 COPB2P35606 906 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 ACLYP53396 1101 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 ANTXR2P58335 489 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 ROM1Q03395 351 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 SPIDRQ14159 915 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 ATP2B3Q16720 1220 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 RTN4RL1Q86UN2 441 aaPredicted RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 CERS3Q8IU89 383 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 CMTM4Q8IZR5 234 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 MSL3Q8N5Y2 521 aaKnown RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 FOXRED1Q96CU9 486 aaPredicted RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 WDR92Q96MX6 357 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 HOXC10Q9NYD6 342 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 KCMF1Q9P0J7 381 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 KIAA1522Q9P206 1035 aaPredicted RBP5.69□□□□□ -1.5
VPS8-219ENST00000469479 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 CNPY2Q9Y2B0 182 aa5.69□□□□□ -1.5
VPS8-219ENST00000469479 LRRC37A2A6NM11 1700 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 A0A0U1RQG5 324 aaPredicted RBP5.68□□□□□ -1.5
VPS8-219ENST00000469479 KIF28PB7ZC32 967 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 EYA2O00167 538 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 APAF1O14727 1248 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 CNMDO75829 334 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 CIAO1O76071 339 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 BAG3O95817 575 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 SLC25A27O95847 323 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 HLA-DOAP06340 250 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 FCER1AP12319 257 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 ACTN1P12814 892 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 ATP2A2P16615 1042 aaKnown RBP5.68□□□□□ -1.5
VPS8-219ENST00000469479 ERCC5P28715 1186 aaPredicted RBP5.68□□□□□ -1.5
VPS8-219ENST00000469479 AVPR1BP47901 424 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 RHBDL3P58872 404 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 ERCC6LQ2NKX8 1250 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 LEXMQ3ZCV2 418 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 LRRC24Q50LG9 513 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 FAM209AQ5JX71 171 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 IQSEC1Q6DN90 963 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 FBXO42Q6P3S6 717 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 CATSPERGQ6ZRH7 1159 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 PHOSPHO2Q8TCD6 241 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 MAML3Q96JK9 1138 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 SLC46A2Q9BY10 475 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 CELF4Q9BZC1 486 aaKnown RBP5.68□□□□□ -1.5
VPS8-219ENST00000469479 SERHL2Q9H4I8 314 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 BICC1Q9H694 974 aaKnown RBP5.68□□□□□ -1.5
VPS8-219ENST00000469479 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 INSL6Q9Y581 213 aa5.68□□□□□ -1.5
VPS8-219ENST00000469479 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 C5orf42Q9H799 3197 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 CENPVL1A0A0U1RR11 272 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 DUSP11O75319 330 aaKnown RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 CABYRO75952 493 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 PGK1P00558 417 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 VCAM1P19320 739 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 CDK7P50613 346 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 MECOMQ03112 1051 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 COG2Q14746 738 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 MVPQ14764 893 aaKnown RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 ZNF362Q5T0B9 420 aaPredicted RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 ANO1Q5XXA6 986 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 FSTL4Q6MZW2 842 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 CC2D1AQ6P1N0 951 aaPredicted RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 CXorf67Q86X51 503 aaPredicted RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 TEX11Q8IYF3 940 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 LCORLQ8N3X6 602 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 SLC7A14Q8TBB6 771 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 TSR2Q969E8 191 aaKnown RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 SUCLG2Q96I99 432 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 TINF2Q9BSI4 451 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 MOV10L1Q9BXT6 1211 aaKnown RBP5.67□□□□□ -1.5
VPS8-219ENST00000469479 SPATC1LQ9H0A9 340 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 SIL1Q9H173 461 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 HIPK3Q9H422 1215 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 NCDNQ9UBB6 729 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 SFMBT1Q9UHJ3 866 aa5.67□□□□□ -1.5
VPS8-219ENST00000469479 HDAC5Q9UQL6 1122 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms