RNA–Protein interactions for RNA: ENST00000469235.5

ARF1-202, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-202ENST00000469235 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
ARF1-202ENST00000469235 OBP2AQ9NY56 170 aa16.8■□□□□ 0.28
ARF1-202ENST00000469235 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
ARF1-202ENST00000469235 UXTQ9UBK9 157 aaPredicted RBP16.8■□□□□ 0.28
ARF1-202ENST00000469235 ZMYM5Q9UJ78 669 aa16.8■□□□□ 0.28
ARF1-202ENST00000469235 CDH9Q9ULB4 789 aa16.8■□□□□ 0.28
ARF1-202ENST00000469235 ATP2C2O75185 946 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 F11P03951 625 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 HMGA1P17096 107 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 WARSP23381 471 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 LMO2P25791 158 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 DDX6P26196 483 aaKnown RBP eCLIP16.79■□□□□ 0.289e-9■□□□□ 8.3
ARF1-202ENST00000469235 WEE1P30291 646 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 AVPR1AP37288 418 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 PSMC1P62191 440 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 FCHO2Q0JRZ9 810 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 CCDC142Q17RM4 750 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 WDR72Q3MJ13 1102 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 ZC3H14Q6PJT7 736 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 MAB21L3Q8N8X9 362 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 KBTBD7Q8WVZ9 684 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 MRPS31Q92665 395 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 CLDN23Q96B33 292 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 FUBP3Q96I24 572 aaKnown RBP eCLIP16.79■□□□□ 0.28
ARF1-202ENST00000469235 TIGD1Q96MW7 591 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 IPO9Q96P70 1041 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 PKMYT1Q99640 499 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 SLC46A2Q9BY10 475 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 THG1LQ9NWX6 298 aaKnown RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 R4GN57 208 aa16.79■□□□□ 0.28
ARF1-202ENST00000469235 PTPRZ1P23471 2315 aaPredicted RBP16.79■□□□□ 0.28
ARF1-202ENST00000469235 F5P12259 2224 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 RIF1Q5UIP0 2472 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 SLC38A8A6NNN8 435 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 PRAMEF12O95522 483 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 RPS9P46781 194 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 CASP4P49662 377 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 CSTF1Q05048 431 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 BIRC3Q13489 604 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 KCNB1Q14721 858 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 MAPRE1Q15691 268 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 CFAP221Q4G0U5 840 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 FAM171BQ6P995 826 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 CMTM8Q8IZV2 173 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 CELF5Q8N6W0 485 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 OR6B3Q8NGW1 331 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 BPIFB1Q8TDL5 484 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 ERCC4Q92889 916 aaPredicted RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 ZFYVE19Q96K21 471 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 LRRC3BQ96PB8 259 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 SMG9Q9H0W8 520 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 KCTD10Q9H3F6 313 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 SEMA4AQ9H3S1 761 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 C8orf33Q9H7E9 229 aaPredicted RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
ARF1-202ENST00000469235 CACNA1IQ9P0X4 2223 aa16.78■□□□□ 0.28
ARF1-202ENST00000469235 TICRRQ7Z2Z1 1910 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 SHISA7A6NL88 538 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 ARNTLO00327 626 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 NOL4O94818 638 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 CCNE1P24864 410 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 ATICP31939 592 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 MAGEA11P43364 429 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 MYL6P60660 151 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 PLCB2Q00722 1185 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 TXNDC8Q6A555 127 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 TMEM150AQ86TG1 271 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 MYLPFQ96A32 169 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 SYAP1Q96A49 352 aaPredicted RBP16.77■□□□□ 0.28
ARF1-202ENST00000469235 MSANTD3Q96H12 275 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 MRPL45Q9BRJ2 306 aaKnown RBP16.77■□□□□ 0.28
ARF1-202ENST00000469235 LMAN1LQ9HAT1 526 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 CRTAC1Q9NQ79 661 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 FBXO4Q9UKT5 387 aa16.77■□□□□ 0.28
ARF1-202ENST00000469235 PDXKO00764 312 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 TACC1O75410 805 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 KIF20AO95235 890 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 NR3C1P04150 777 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 BDNFP23560 247 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 ANXA13P27216 316 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 GRIK1P39086 918 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 SOX9P48436 509 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 AP3M2P53677 418 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 MLLT6P55198 1093 aaPredicted RBP16.76■□□□□ 0.27
ARF1-202ENST00000469235 FZD5Q13467 585 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 MDH1BQ5I0G3 518 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 C1orf228Q6PIY5 440 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 VSTM1Q6UX27 236 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 MON1AQ86VX9 555 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 SLC9A9Q8IVB4 645 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 MAML2Q8IZL2 1156 aaPredicted RBP16.76■□□□□ 0.27
ARF1-202ENST00000469235 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
ARF1-202ENST00000469235 MYCBPAPQ8TBZ2 947 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms