RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 TEX51A0A1B0GUA7 166 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 A0A1W2PQD8 194 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 TLX3O43711 291 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-217ENST00000469223 DKK1O94907 266 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.21
HDAC6-217ENST00000469223 NTRK3Q16288 839 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 MGAT5BQ3V5L5 792 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 GPR155Q7Z3F1 870 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 IL17RCQ8NAC3 791 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 BAHD1Q8TBE0 780 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-217ENST00000469223 OXCT2Q9BYC2 517 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-217ENST00000469223 CNTN3Q9P232 1028 aa13.71□□□□□ -0.21
HDAC6-217ENST00000469223 SCN1AP35498 2009 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 USP9YO00507 2555 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 CCNT1O60563 726 aaKnown RBP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 ATP2B1P20020 1258 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 DDX6P26196 483 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 HSPA4P34932 840 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 TIE1P35590 1138 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 NAMPTP43490 491 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 NLRP12P59046 1061 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 MRPS21P82921 87 aaKnown RBP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 MYBPC2Q14324 1141 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 KRT32Q14532 448 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 ZNF268Q14587 947 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-217ENST00000469223 ADCK5Q3MIX3 580 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 OVOS1Q6IE37 1185 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 TRIML1Q8N9V2 468 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 STKLD1Q8NE28 680 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 NXPE2Q96DL1 559 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 ARID3AQ99856 593 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 HSD17B14Q9BPX1 270 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 DOPEY1Q5JWR5 2465 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 ABCA12Q86UK0 2595 aa13.7□□□□□ -0.22
HDAC6-217ENST00000469223 AHCTF1Q8WYP5 2266 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 PLK4O00444 970 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 WISP1O95388 367 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
HDAC6-217ENST00000469223 HLA-EP13747 358 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 CPA1P15085 419 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 MESP2Q0VG99 397 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 SLC39A12Q504Y0 691 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 TAF1BQ53T94 588 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-217ENST00000469223 CCDC157Q569K6 752 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
HDAC6-217ENST00000469223 BRF1Q92994 677 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 IL21RQ9HBE5 538 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 CALCOCO1Q9P1Z2 691 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
HDAC6-217ENST00000469223 ERVH48-1M5A8F1 160 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 ADAM23O75077 832 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 F11P03951 625 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 IFNAR1P17181 557 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 TUFMP49411 452 aaKnown RBP13.68□□□□□ -0.22
HDAC6-217ENST00000469223 SEMG2Q02383 582 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 FAM160A1Q05DH4 1040 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 NR1H3Q13133 447 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 BECN1Q14457 450 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 GAB4Q2WGN9 574 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 EOGTQ5NDL2 527 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 ARMCX5Q6P1M9 558 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 DSTYKQ6XUX3 929 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 OR10T2Q8NGX3 314 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 ACAP3Q96P50 834 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 KIF2CQ99661 725 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 SEMA4CQ9C0C4 833 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
HDAC6-217ENST00000469223 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 HSFX1Q9UBD0 423 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 SUSD2Q9UGT4 822 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 MYH11P35749 1972 aa13.68□□□□□ -0.22
HDAC6-217ENST00000469223 RELNP78509 3460 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 IGHV1OR15-9A0A0B4J2B8 117 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 RRP8O43159 456 aaKnown RBP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 TADA3O75528 432 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 NFATC1O95644 943 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 CKMP06732 381 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 AARSP49588 968 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 EFNA5P52803 228 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 CXADRP78310 365 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 KDSRQ06136 332 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 DMP1Q13316 513 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 PPP2R5AQ15172 486 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
HDAC6-217ENST00000469223 Q6ZUG5 572 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 FMNL3Q8IVF7 1028 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 AIFM3Q96NN9 605 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 NACC1Q96RE7 527 aa13.67□□□□□ -0.22
HDAC6-217ENST00000469223 SLC22A12Q96S37 553 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms