RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 MYCBPAPQ8TBZ2 947 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 PHOSPHO2Q8TCD6 241 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
RUNX1-213ENST00000469087 PCED1BQ96HM7 432 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 VCPIP1Q96JH7 1222 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 PKMYT1Q99640 499 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 C11orf70Q9BRQ4 267 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 VN1R3Q9BXE9 311 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 OSGEPQ9NPF4 335 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 CEP83Q9Y592 693 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 MYH10P35580 1976 aa13.59□□□□□ -0.23
RUNX1-213ENST00000469087 FANCGO15287 622 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.23
RUNX1-213ENST00000469087 LINC00271P0C7V0 271 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ATP2A2P16615 1042 aaKnown RBP13.58□□□□□ -0.23
RUNX1-213ENST00000469087 RRM1P23921 792 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 GNG11P61952 73 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ELAVL2Q12926 359 aaKnown RBP13.58□□□□□ -0.23
RUNX1-213ENST00000469087 PTPN20Q4JDL3 420 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 INTS6LQ5JSJ4 861 aaKnown RBP13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ZNF569Q5MCW4 686 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 RASIP1Q5U651 963 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 PMF1Q6P1K2 205 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ERICH1Q86X53 443 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.23
RUNX1-213ENST00000469087 SLC39A11Q8N1S5 342 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 COLGALT1Q8NBJ5 622 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ZNF653Q96CK0 615 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 ZNF558Q96NG5 402 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 WDR24Q96S15 920 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 CPXM1Q96SM3 734 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 HESX1Q9UBX0 185 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 CNOT8Q9UFF9 292 aaKnown RBP13.58□□□□□ -0.23
RUNX1-213ENST00000469087 COG5Q9UP83 839 aa13.58□□□□□ -0.23
RUNX1-213ENST00000469087 A0A0A6YYK5 440 aaPredicted RBP13.58□□□□□ -0.24
RUNX1-213ENST00000469087 KIF5CO60282 957 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 BEST1O76090 585 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 CYP1A2P05177 515 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 OR4Q2P0C623 313 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 LAG3P18627 525 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 NOP2P46087 812 aaKnown RBP13.58□□□□□ -0.24
RUNX1-213ENST00000469087 NAP1L1P55209 391 aaKnown RBP13.58□□□□□ -0.24
RUNX1-213ENST00000469087 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
RUNX1-213ENST00000469087 PDE4CQ08493 712 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 RTP2Q5QGT7 225 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 SYT10Q6XYQ8 523 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
RUNX1-213ENST00000469087 TNS4Q8IZW8 715 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 RFFLQ8WZ73 363 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 RAD9AQ99638 391 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 CAPN6Q9Y6Q1 641 aa13.58□□□□□ -0.24
RUNX1-213ENST00000469087 TBC1D4O60343 1298 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 GABBR2O75899 941 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
RUNX1-213ENST00000469087 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 PDCLQ13371 301 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 PPP1R2P3Q6NXS1 205 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 SLC35F6Q8N357 371 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 FIBCD1Q8N539 461 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 TTPALQ9BTX7 342 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 DUSP16Q9BY84 665 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 CHST7Q9NS84 486 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 NR2E3Q9Y5X4 410 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 NCANO14594 1321 aa13.57□□□□□ -0.24
RUNX1-213ENST00000469087 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 TLL1O43897 1013 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 ERBB2P04626 1255 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 MYBL1P10243 752 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 GABRB2P47870 512 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 RGS7P49802 495 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 BCAT1P54687 386 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 BST2Q10589 180 aaKnown RBP13.56□□□□□ -0.24
RUNX1-213ENST00000469087 SHHQ15465 462 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 CTXN3Q4LDR2 81 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 RSPO2Q6UXX9 243 aaPredicted RBP13.56□□□□□ -0.24
RUNX1-213ENST00000469087 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 MYLPFQ96A32 169 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 C18orf8Q96DM3 657 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 KCNK16Q96T55 309 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 SLC4A5Q9BY07 1137 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 RHOBTB2Q9BYZ6 727 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 ZCWPW1Q9H0M4 648 aa13.56□□□□□ -0.24
RUNX1-213ENST00000469087 ST7Q9NRC1 585 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms