RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 LRRC37BQ96QE4 947 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 RAB3IPQ96QF0 476 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 R3HDMLQ9H3Y0 253 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 PSMC3IPQ9P2W1 217 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 SLC24A2Q9UI40 661 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 CSADQ9Y600 493 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 KIF3CO14782 793 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 PSMC4P43686 418 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 MYL6P60660 151 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 DYNLT1P63172 113 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 CRYMQ14894 314 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 ZBTB33Q86T24 672 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 ERICH1Q86X53 443 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.252e-9■■■■■ 55.1
TSPAN4-211ENST00000468468 KCNN1Q92952 543 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 OTUD5Q96G74 571 aa16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 MAK16Q9BXY0 300 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-211ENST00000468468 LCTP09848 1927 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 DICER1Q9UPY3 1922 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 DIAPH2O60879 1101 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 STAM2O75886 525 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 GPX6P59796 221 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 HIF1AQ16665 826 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 WDTC1Q8N5D0 677 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 UTP4Q969X6 686 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 C10orf88Q9H8K7 445 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 CISHQ9NSE2 258 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 SAE1Q9UBE0 346 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 MYH9P35579 1960 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 NDC80O14777 642 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 TYROBPO43914 113 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 ATP5HO75947 161 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 TARSP26639 723 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 ALDH3A1P30838 453 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 TAP1Q03518 808 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 STXBP2Q15833 593 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 PPP1R15BQ5SWA1 713 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 BRSK2Q8IWQ3 736 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 SLC35B2Q8TB61 432 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 TMEM134Q9H6X4 195 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 PPCSQ9HAB8 311 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 HAO1Q9UJM8 370 aa16.59■□□□□ 0.25
TSPAN4-211ENST00000468468 DCTN3O75935 186 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 PEX19P40855 299 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 GEMIN4P57678 1058 aaKnown RBP16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 GAD2Q05329 585 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 CAPSQ13938 189 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 CHST13Q8NET6 341 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 TMEM237Q96Q45 408 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 ZWILCHQ9H900 591 aa16.58■□□□□ 0.25
TSPAN4-211ENST00000468468 SBF1O95248 1867 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 ATG7O95352 703 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 KRT4P19013 534 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 SSTR1P30872 391 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 IRX1P78414 480 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 EFHC2Q5JST6 749 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 PCGF5Q86SE9 256 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 NCAPG2Q86XI2 1143 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 WDR49Q8IV35 697 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 ZNF483Q8TF39 744 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 PYROXD1Q8WU10 500 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 TFAP2BQ92481 460 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 ZNF518BQ9C0D4 1074 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 RABGEF1Q9UJ41 708 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 CLUHO75153 1309 aa16.58■□□□□ 0.24
TSPAN4-211ENST00000468468 AP3M2P53677 418 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 OTUD4Q01804 1114 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 TFDP1Q14186 410 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 EFTUD2Q15029 972 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■□□ 16.1
TSPAN4-211ENST00000468468 SMTNL2Q2TAL5 461 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 ANKRD22Q5VYY1 191 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 SCARA5Q6ZMJ2 495 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 TAB3Q8N5C8 712 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 ACTL9Q8TC94 416 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 ZNF75CPQ92670 426 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 LRMDAQ9H2I8 198 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 FARP1Q9Y4F1 1045 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 KLHL33A6NCF5 533 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 ADCY3O60266 1144 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 PIAS1O75925 651 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 PSMA2P25787 234 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 PHBP35232 272 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 GDF10P55107 478 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 ARL4CP56559 192 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 RASA2Q15283 850 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 PARP6Q2NL67 630 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 FNBP1LQ5T0N5 605 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 PPIL6Q8IXY8 311 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms