RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 ZNF883P0CG24 379 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 P2RX3P56373 397 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 PPATQ06203 517 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 DACT2Q5SW24 774 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 PARS2Q7L3T8 475 aaKnown RBP1.68□□□□□ -2.14
SHQ1-204ENST00000468347 FAM109AQ8N4B1 249 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 LRRC71Q8N4P6 559 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 PNISRQ8TF01 805 aaKnown RBP1.68□□□□□ -2.14
SHQ1-204ENST00000468347 HOXB13Q92826 284 aaPredicted RBP1.68□□□□□ -2.14
SHQ1-204ENST00000468347 THAP7Q9BT49 309 aaPredicted RBP1.68□□□□□ -2.14
SHQ1-204ENST00000468347 TRIM39Q9HCM9 518 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 TCF7L2Q9NQB0 619 aa1.68□□□□□ -2.14
SHQ1-204ENST00000468347 TTBK1Q5TCY1 1321 aaPredicted RBP1.67□□□□□ -2.14
SHQ1-204ENST00000468347 DENND3A2RUS2 1198 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 BTBD18B2RXH4 712 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 EPN2O95208 641 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 PDE8BO95263 885 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 IL6STP40189 918 aaPredicted RBP1.67□□□□□ -2.14
SHQ1-204ENST00000468347 ALDH5A1P51649 535 aaPredicted RBP1.67□□□□□ -2.14
SHQ1-204ENST00000468347 CLCN2P51788 898 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 LGALS4P56470 323 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 B4GALNT1Q00973 533 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 SSRP1Q08945 709 aaKnown RBP1.67□□□□□ -2.14
SHQ1-204ENST00000468347 SLC4A8Q2Y0W8 1093 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 ZNF750Q32MQ0 723 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 UTP14CQ5TAP6 766 aaKnown RBP1.67□□□□□ -2.14
SHQ1-204ENST00000468347 RFX8Q6ZV50 586 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 DTX2Q86UW9 622 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 KRTAP7-1Q8IUC3 87 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 RP9Q8TA86 221 aaKnown RBP1.67□□□□□ -2.14
SHQ1-204ENST00000468347 ADAMTS18Q8TE60 1221 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 TRIB1Q96RU8 372 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 TM6SF1Q9BZW5 370 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 CACNA1FO60840 1977 aa1.67□□□□□ -2.14
SHQ1-204ENST00000468347 CBX4O00257 560 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 PPM1DO15297 605 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 SLC16A3O15427 465 aaKnown RBP1.66□□□□□ -2.14
SHQ1-204ENST00000468347 EXTL3O43909 919 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 KRT36O76013 467 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 GPSM2P81274 684 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 LMAN2Q12907 356 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 MTM1Q13496 603 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 LONRF2Q1L5Z9 754 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 INO80DQ53TQ3 878 aaPredicted RBP1.66□□□□□ -2.14
SHQ1-204ENST00000468347 TREML2Q5T2D2 321 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 RBM20Q5T481 1227 aaKnown RBP1.66□□□□□ -2.14
SHQ1-204ENST00000468347 PMS2CLQ68D20 193 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 SRGAP1Q7Z6B7 1085 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 MORC1Q86VD1 984 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 LIX1LQ8IVB5 337 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 FYTTD1Q96QD9 318 aaKnown RBP1.66□□□□□ -2.14
SHQ1-204ENST00000468347 RBM38Q9H0Z9 239 aaKnown RBP1.66□□□□□ -2.14
SHQ1-204ENST00000468347 KCTD10Q9H3F6 313 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 CAPN10Q9HC96 672 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 PFDN2Q9UHV9 154 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 LIMCH1Q9UPQ0 1083 aa1.66□□□□□ -2.14
SHQ1-204ENST00000468347 KLF4O43474 513 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 GPR32O75388 356 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 ATP2A2P16615 1042 aaKnown RBP1.65□□□□□ -2.15
SHQ1-204ENST00000468347 PDE1AP54750 535 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 POU3F1Q03052 451 aaPredicted RBP1.65□□□□□ -2.15
SHQ1-204ENST00000468347 ZRSR1Q15695 479 aaKnown RBP1.65□□□□□ -2.15
SHQ1-204ENST00000468347 TMTC4Q5T4D3 741 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 TRILQ7L0X0 811 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 UBE2Q1Q7Z7E8 422 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 EFHBQ8N7U6 833 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 PHF21BQ96EK2 531 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 SF3B5Q9BWJ5 86 aaKnown RBP1.65□□□□□ -2.15
SHQ1-204ENST00000468347 CIPCQ9C0C6 399 aa1.65□□□□□ -2.15
SHQ1-204ENST00000468347 MRPS18AQ9NVS2 196 aaKnown RBP1.65□□□□□ -2.15
SHQ1-204ENST00000468347 AGRNO00468 2067 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 IGKV3D-15A0A087WSY6 115 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 BTBD19C9JJ37 291 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 TLR5O60602 858 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 ZG16O60844 167 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 TJP3O95049 919 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 NDUFB8O95169 186 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 PPP1R3DO95685 299 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 APOHP02749 345 aaPredicted RBP1.64□□□□□ -2.15
SHQ1-204ENST00000468347 TBXAS1P24557 533 aaPredicted RBP1.64□□□□□ -2.15
SHQ1-204ENST00000468347 POLD2P49005 469 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 ALDH7A1P49419 539 aaKnown RBP1.64□□□□□ -2.15
SHQ1-204ENST00000468347 CREMQ03060 361 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 COASYQ13057 564 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 TBC1D25Q3MII6 688 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 SLC9C1Q4G0N8 1177 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 WASHC2DQ5SRD0 308 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 PRAMEF19Q5SWL8 479 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 VPS53Q5VIR6 699 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 FAM180AQ6UWF9 173 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 DSTYKQ6XUX3 929 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 Q6ZWC4 215 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 VPS37DQ86XT2 251 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 PASD1Q8IV76 773 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 WDSUB1Q8N9V3 476 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 ABHD11Q8NFV4 315 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 SH3TC2Q8TF17 1288 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 SMOQ99835 787 aa1.64□□□□□ -2.15
SHQ1-204ENST00000468347 MRPL4Q9BYD3 311 aaKnown RBP1.64□□□□□ -2.15
SHQ1-204ENST00000468347 TGIF2Q9GZN2 237 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms