RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 LONP2Q86WA8 852 aa22.61■■□□□ 1.21
COL9A3-207ENST00000467819 RIN3Q8TB24 985 aa22.61■■□□□ 1.21
COL9A3-207ENST00000467819 PKMYT1Q99640 499 aa22.61■■□□□ 1.21
COL9A3-207ENST00000467819 FAM83CQ9BQN1 747 aa22.61■■□□□ 1.21
COL9A3-207ENST00000467819 KIF9Q9HAQ2 790 aa22.61■■□□□ 1.21
COL9A3-207ENST00000467819 ABCB6Q9NP58 842 aa22.61■■□□□ 1.21
COL9A3-207ENST00000467819 CDV3Q9UKY7 258 aaKnown RBP22.61■■□□□ 1.21
COL9A3-207ENST00000467819 R3HCC1Q9Y3T6 440 aaKnown RBP22.61■■□□□ 1.21
COL9A3-207ENST00000467819 MYO16Q9Y6X6 1858 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 EML5Q05BV3 1969 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 PRR5-ARHGAP8B1AHC4 643 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 TADA3O75528 432 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 ARHGAP8P85298 464 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 RUNX3Q13761 415 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 STXBP4Q6ZWJ1 553 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 MON1AQ86VX9 555 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 SPATA2LQ8IUW3 424 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-207ENST00000467819 SCN4BQ8IWT1 228 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 TOP6BLQ8N6T0 577 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 TTC16Q8NEE8 873 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 OR5B17Q8NGF7 314 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 TNMDQ9H2S6 317 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 TRPC7Q9HCX4 862 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 INTS13Q9NVM9 706 aa22.6■■□□□ 1.21
COL9A3-207ENST00000467819 UXTQ9UBK9 157 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-207ENST00000467819 OTOL1A6NHN0 477 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-207ENST00000467819 NOL4O94818 638 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 TNNC2P02585 160 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 ARSAP15289 507 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 SDHBP21912 280 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 PCSK1P29120 753 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 LHX1P48742 406 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 SOWAHAQ2M3V2 549 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 CC2D1AQ6P1N0 951 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-207ENST00000467819 PKN3Q6P5Z2 889 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-207ENST00000467819 CBWD2Q8IUF1 395 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 SYNPOQ8N3V7 929 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 LINC00301Q8NCQ3 95 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 SPATA18Q8TC71 538 aa22.59■■□□□ 1.21
COL9A3-207ENST00000467819 ZNF233A6NK53 670 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 K7ELQ4 463 aaPredicted RBP22.58■■□□□ 1.21
COL9A3-207ENST00000467819 KIAA0391O15091 583 aaKnown RBP22.58■■□□□ 1.21
COL9A3-207ENST00000467819 SPTLC2O15270 562 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 RETP07949 1114 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 ATXN1P54253 815 aaKnown RBP22.58■■□□□ 1.21
COL9A3-207ENST00000467819 MYO1EQ12965 1108 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 FSTL4Q6MZW2 842 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 DHX58Q96C10 678 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 TRMT2BQ96GJ1 504 aaKnown RBP22.58■■□□□ 1.21
COL9A3-207ENST00000467819 HPDLQ96IR7 371 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 HSPBP1Q9NZL4 362 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 TFIP11Q9UBB9 837 aaKnown RBP22.58■■□□□ 1.21
COL9A3-207ENST00000467819 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.58■■□□□ 1.21
COL9A3-207ENST00000467819 KIAA1549LQ6ZVL6 1849 aa22.58■■□□□ 1.21
COL9A3-207ENST00000467819 GABRDO14764 452 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 ATP2C2O75185 946 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 CNR2P34972 360 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 PSMC1P62191 440 aaKnown RBP22.57■■□□□ 1.2
COL9A3-207ENST00000467819 ASIC1P78348 528 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 GRSF1Q12849 480 aaKnown RBP eCLIP22.57■■□□□ 1.23e-8■■■■■ 27.8
COL9A3-207ENST00000467819 E2F4Q16254 413 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 CFAP221Q4G0U5 840 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 TMEM196Q5HYL7 178 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 CEP68Q76N32 757 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 CHFRQ96EP1 664 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 SYT15Q9BQS2 421 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 TRIM9Q9C026 710 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 LRRC27Q9C0I9 530 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 KBTBD4Q9NVX7 518 aa22.57■■□□□ 1.2
COL9A3-207ENST00000467819 SOBPA7XYQ1 873 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 CKMP06732 381 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 HOXD13P35453 343 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 ZNF268Q14587 947 aaPredicted RBP22.56■■□□□ 1.2
COL9A3-207ENST00000467819 MTF1Q14872 753 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 SURF1Q15526 300 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 DUOXA2Q1HG44 320 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 KBTBD7Q8WVZ9 684 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 FUBP3Q96I24 572 aaKnown RBP eCLIP22.56■■□□□ 1.2
COL9A3-207ENST00000467819 MYRFLQ96LU7 910 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 SLC22A12Q96S37 553 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 CYP2S1Q96SQ9 504 aa22.56■■□□□ 1.2
COL9A3-207ENST00000467819 TRAV19A0A0A6YYK7 116 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 TRDMT1O14717 391 aaKnown RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 PPP6R2O75170 966 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 EGFP01133 1207 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 USP17L7P0C7H9 530 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 LMO2P25791 158 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 PXNP49023 591 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 FAM160A1Q05DH4 1040 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 PDGFRLQ15198 375 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 FOXD4L5Q5VV16 416 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 NAIF1Q69YI7 327 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 FAM171BQ6P995 826 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 C4orf50Q6ZRC1 276 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 DPH6Q7L8W6 267 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 WDR5BQ86VZ2 330 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 RDH13Q8NBN7 331 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 FOXD4L4Q8WXT5 416 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 MYLPFQ96A32 169 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms