RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CELSR3Q9NYQ7 3312 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 CACNA1EQ15878 2313 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 OBSL1O75147 1896 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 PPP1R37O75864 691 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 CAPNS1P04632 268 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 CSH1P0DML2 217 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 CSH2P0DML3 217 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.319e-7■■■■□ 24.9
UBR4-211ENST00000467272 OPRD1P41143 372 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 MATR3P43243 847 aaKnown RBP eCLIP13.14□□□□□ -0.317e-8■■■■■ 30.8
UBR4-211ENST00000467272 ACOT2P49753 483 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 WNT7BP56706 349 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 CREB5Q02930 508 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 BFSP1Q12934 665 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 METTL23Q86XA0 190 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 DCP1BQ8IZD4 617 aaKnown RBP13.14□□□□□ -0.31
UBR4-211ENST00000467272 THEM5Q8N1Q8 247 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 KIAA1958Q8N8K9 716 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 STKLD1Q8NE28 680 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 ACDQ96AP0 544 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 CNOT6LQ96LI5 555 aaKnown RBP13.14□□□□□ -0.31
UBR4-211ENST00000467272 CYP2S1Q96SQ9 504 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 PLIN2Q99541 437 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 ACBD6Q9BR61 282 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
UBR4-211ENST00000467272 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
UBR4-211ENST00000467272 ABI2Q9NYB9 513 aaPredicted RBP13.14□□□□□ -0.31
UBR4-211ENST00000467272 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
UBR4-211ENST00000467272 ANK1P16157 1881 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 A0A0A0MRY4 1105 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 FAM221BA6H8Z2 402 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 GABRDO14764 452 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 TRAK2O60296 914 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 SPINK2P20155 84 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 BCKDHBP21953 392 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 NFE2Q16621 373 aaPredicted RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 SDHAF4Q5VUM1 108 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 PEAR1Q5VY43 1037 aaPredicted RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 NT5DC4Q86YG4 428 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 ATP2A3Q93084 1043 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 AK8Q96MA6 479 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 LINC00597Q9H2U6 94 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 DUS2Q9NX74 493 aaKnown RBP13.13□□□□□ -0.31
UBR4-211ENST00000467272 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
UBR4-211ENST00000467272 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 VWA3AA6NCI4 1184 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 K7ENM7 598 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 CYP2F1P24903 491 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 ABCD1P33897 745 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 IRX4P78413 519 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 MESP2Q0VG99 397 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 ZRSR1Q15695 479 aaKnown RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 TAF12Q16514 161 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 DDR2Q16832 855 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 INTS6LQ5JSJ4 861 aaKnown RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 CC2D1AQ6P1N0 951 aaPredicted RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 GPBP1Q86WP2 473 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 MDGA1Q8NFP4 955 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 FNBP1Q96RU3 617 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 GDAP2Q9NXN4 497 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 UXTQ9UBK9 157 aaPredicted RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
UBR4-211ENST00000467272 MMP17Q9ULZ9 603 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 ARHGAP26Q9UNA1 814 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 MYO16Q9Y6X6 1858 aa13.12□□□□□ -0.31
UBR4-211ENST00000467272 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 KHNYNO15037 678 aaKnown RBP13.11□□□□□ -0.31
UBR4-211ENST00000467272 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
UBR4-211ENST00000467272 OLFM2O95897 454 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 USP17L7P0C7H9 530 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 PNPLA4P41247 253 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms