RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 CPXM1Q96SM3 734 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 HNRNPABQ99729 332 aaKnown RBP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 B3GNT5Q9BYG0 378 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 GPR62Q9BZJ7 368 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 PRKAG2Q9UGJ0 569 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 SYN3O14994 580 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 TADA2AO75478 443 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 PALMO75781 387 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 OAZ2O95190 189 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 ERBB2P04626 1255 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 LINC00271P0C7V0 271 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 SETSIPP0DME0 302 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 FGFR3P22607 806 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 ADORA2BP29275 332 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-202ENST00000467182 PDE4CQ08493 712 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 PDCLQ13371 301 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 INTS6LQ5JSJ4 861 aaKnown RBP13.76□□□□□ -0.21
COL4A1-202ENST00000467182 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 COL13A1Q5TAT6 717 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-202ENST00000467182 OVOS1Q6IE37 1185 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 TRIM58Q8NG06 486 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 NUP85Q9BW27 656 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 VN1R3Q9BXE9 311 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 ABCB6Q9NP58 842 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 TMLHEQ9NVH6 421 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 CXXC1Q9P0U4 656 aaPredicted RBP13.76□□□□□ -0.21
COL4A1-202ENST00000467182 CEP83Q9Y592 693 aa13.76□□□□□ -0.21
COL4A1-202ENST00000467182 MRPL42Q9Y6G3 142 aaKnown RBP13.76□□□□□ -0.21
COL4A1-202ENST00000467182 CLDN5O00501 218 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
COL4A1-202ENST00000467182 CALB1P05937 261 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 PCSK1P29120 753 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 CASQ1P31415 396 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
COL4A1-202ENST00000467182 AMPD2Q01433 879 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 PLCB3Q01970 1234 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
COL4A1-202ENST00000467182 MAMLD1Q13495 774 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 PMF1Q6P1K2 205 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
COL4A1-202ENST00000467182 TAS1R1Q7RTX1 841 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 LRRTM3Q86VH5 581 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 ERICH1Q86X53 443 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 XYLT1Q86Y38 959 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 KIF18AQ8NI77 898 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 ZNF564Q8TBZ8 553 aaPredicted RBP13.75□□□□□ -0.21
COL4A1-202ENST00000467182 STK32AQ8WU08 396 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 PCED1BQ96HM7 432 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 GOLPH3Q9H4A6 298 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 CTTNBP2NLQ9P2B4 639 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 UVRAGQ9P2Y5 699 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 ZMYND8Q9ULU4 1186 aaPredicted RBP13.75□□□□□ -0.21
COL4A1-202ENST00000467182 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
COL4A1-202ENST00000467182 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 TRAPPC3O43617 180 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 TBC1D4O60343 1298 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 GJB5O95377 273 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 GJB6O95452 261 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 ATP1A1P05023 1023 aaKnown RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 CACNA2D1P54289 1103 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 BCAT1P54687 386 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 BST2Q10589 180 aaKnown RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 RTP2Q5QGT7 225 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 VARS2Q5ST30 1063 aaKnown RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 CYP4A22Q5TCH4 519 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 MEI1Q5TIA1 1274 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 FAM171A1Q5VUB5 890 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 PAPD7Q5XG87 772 aaKnown RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 TMEM110Q86TL2 294 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 FAM35AQ86V20 835 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 SLC39A11Q8N1S5 342 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 ZMIZ2Q8NF64 920 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 MYLPFQ96A32 169 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 IGSF21Q96ID5 467 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 B3GALT6Q96L58 329 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
COL4A1-202ENST00000467182 TLR10Q9BXR5 811 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms