RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PNPOQ9NVS9 261 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 GABRQQ9UN88 632 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 MED16Q9Y2X0 877 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 PCDHA1Q9Y5I3 950 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 COL4A3BPQ9Y5P4 624 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 MOSPD3O75425 235 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 ONECUT2O95948 504 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 CTGFP29279 349 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 MPGP29372 298 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 CYP2C18P33260 490 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 BRDTQ58F21 947 aaPredicted RBP3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 YTHDF3Q7Z739 585 aaKnown RBP3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 RPL36ALQ969Q0 106 aaKnown RBP3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 CHMP4CQ96CF2 233 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 HSPBAP1Q96EW2 488 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 RITA1Q96K30 269 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 MRGPRX1Q96LB2 322 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 NUP88Q99567 741 aaPredicted RBP3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 PTDSS2Q9BVG9 487 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 NDRG4Q9ULP0 352 aaKnown RBP3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 ADAMTS5Q9UNA0 930 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 PLEKHM1Q9Y4G2 1056 aa3.86□□□□□ -1.79
GTF3C3-209ENST00000466862 PRRT4C9JH25 899 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 H7C1Q1 480 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 PPP6CO00743 305 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 SNUPNO95149 360 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 TUBB4AP04350 444 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 ALDH2P05091 517 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 FESP07332 822 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 ENGP17813 658 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 AKAP5P24588 427 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 PXNP49023 591 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 ZIK1Q3SY52 487 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 ATAT1Q5SQI0 421 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 ARHGAP40Q5TG30 622 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 RGS7BPQ6MZT1 257 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC18B1Q6NT16 456 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 KIRREL2Q6UWL6 708 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 CHSY1Q86X52 802 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 C8orf58Q8NAV2 365 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 RP9Q8TA86 221 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 SOCS4Q8WXH5 440 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 GLG1Q92896 1179 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 HPS3Q969F9 1004 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 SH2D3AQ9BRG2 576 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 QTRT1Q9BXR0 403 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 KRTAP1-5Q9BYS1 174 aa3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 LUC7L2Q9Y383 392 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-209ENST00000466862 SMIM22K7EJ46 135 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 ABLIM3O94929 683 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 IL33O95760 270 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 GRPP07492 148 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 FAM163BP0C2L3 166 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 PTGER1P34995 402 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 ALDH9A1P49189 494 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 NEK2P51955 445 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 IQCB1Q15051 598 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 CYP1B1Q16678 543 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 CATSPERGQ6ZRH7 1159 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 Q6ZWC4 215 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 GALNT16Q8N428 558 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 FANCBQ8NB91 859 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 CYP2W1Q8TAV3 490 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 MESP1Q9BRJ9 268 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 PRSS22Q9GZN4 317 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 CXorf36Q9H7Y0 433 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 STXBP5LQ9Y2K9 1186 aa3.84□□□□□ -1.79
GTF3C3-209ENST00000466862 SMIM35A0A1B0GVV1 85 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 A1L4Q6 167 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 QSOX1O00391 747 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 BCAR3O75815 825 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 NPSP0C0P6 89 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 CCND1P24385 295 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 SLC11A2P49281 568 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 ARFIP2P53365 341 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 RAB1AP62820 205 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 PCID2Q5JVF3 399 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 SLC2A7Q6PXP3 512 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 NAPRTQ6XQN6 538 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 TRIM72Q6ZMU5 477 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 ZBTB46Q86UZ6 589 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 PCSK9Q8NBP7 692 aaKnown RBP3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 R3HDM4Q96D70 268 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 CDK5RAP3Q96JB5 506 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 LENG8Q96PV6 779 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 CGRRF1Q99675 332 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 GLOD4Q9HC38 313 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 NRIP3Q9NQ35 241 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 PDGFCQ9NRA1 345 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 XPR1Q9UBH6 696 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 GABBR1Q9UBS5 961 aa3.83□□□□□ -1.8
GTF3C3-209ENST00000466862 A0A087WWL8 130 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 E5RJQ4 531 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 H3BUI4 141 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 hCG_1984214I3L0E3 225 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 CYP2D6P10635 497 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 PDE6CP51160 858 aa3.82□□□□□ -1.8
GTF3C3-209ENST00000466862 UCP3P55916 312 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms