RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 IPPKQ9H8X2 491 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 AGO4Q9HCK5 861 aaKnown RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 PRDM5Q9NQX1 630 aaPredicted RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 TOPORSQ9NS56 1045 aaPredicted RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 TOMM22Q9NS69 142 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 CATSPERZQ9NTU4 200 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 TRMT1Q9NXH9 659 aaKnown RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 MAP3K20Q9NYL2 800 aaKnown RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 DDX20Q9UHI6 824 aaKnown RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 TMEFF2Q9UIK5 374 aaPredicted RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 PCDHA7Q9UN72 937 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 JAG2Q9Y219 1238 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 PPP2R2CQ9Y2T4 447 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 IPPQ9Y573 584 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 TIMM13Q9Y5L4 95 aaPredicted RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 GPR45Q9Y5Y3 372 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 UBR5O95071 2799 aaPredicted RBP3.77□□□□□ -1.81
SORT1-202ENST00000466471 FANCMQ8IYD8 2048 aa3.77□□□□□ -1.81
SORT1-202ENST00000466471 ITIH6Q6UXX5 1313 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SH3TC1Q8TE82 1336 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 hCG_1642624A0A1W2PR95 340 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 VPS37CA5D8V6 355 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 ERVV-1B6SEH8 477 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 ARNTLO00327 626 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 PDHXO00330 501 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 TNPO2O14787 897 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 FRS3O43559 492 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 KDM1AO60341 852 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 MSCO60682 206 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SURF6O75683 361 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 KRT38O76015 456 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 FSBPO95073 299 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 CTDNEP1O95476 244 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SYF2O95926 243 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 ADRB1P08588 477 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 NFICP08651 508 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 IL9P15248 144 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 PRLRP16471 622 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 ATP5JP18859 108 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 RAB6AP20340 208 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SDHAP31040 664 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 GRK6P43250 576 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 PIP4K2AP48426 406 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 FNTAP49354 379 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 MRPL12P52815 198 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 SCAND1P57086 179 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 RPL11P62913 178 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 SATB1Q01826 763 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 MYL5Q02045 173 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 ZP2Q05996 745 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 DRP2Q13474 957 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 BIRC3Q13489 604 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 NR1I3Q14994 352 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SLC39A14Q15043 492 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 TAF7Q15545 349 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 CPSF6Q16630 551 aaKnown RBP eCLIP3.76□□□□□ -1.81
SORT1-202ENST00000466471 MTHFSDQ2M296 383 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 LEXMQ3ZCV2 418 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 DACT2Q5SW24 774 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 GJC2Q5T442 439 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 SUSD4Q5VX71 490 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SULT6B1Q6IMI4 303 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 CWC27Q6UX04 472 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 SEZ6L2Q6UXD5 910 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 USP45Q70EL2 814 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 APTXQ7Z2E3 356 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 ERO1BQ86YB8 467 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 DENND1CQ8IV53 801 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 NOSTRINQ8IVI9 506 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 KIAA0319LQ8IZA0 1049 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 NECAB1Q8N987 351 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 EIF1ADQ8N9N8 165 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 TC2NQ8N9U0 490 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 IL17REQ8NFR9 667 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 TBC1D16Q8TBP0 767 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.76□□□□□ -1.81
SORT1-202ENST00000466471 TBC1D22AQ8WUA7 517 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 TRIB2Q92519 343 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 DLG3Q92796 817 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 ERCC4Q92889 916 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 GATA6Q92908 595 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 NKD2Q969F2 451 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 MVB12AQ96EY5 273 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 Q96M66 194 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 LRGUKQ96M69 825 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 CCDC138Q96M89 665 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SENP6Q9GZR1 1112 aaPredicted RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 BTBD1Q9H0C5 482 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SEMA6CQ9H3T2 930 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 CXorf56Q9H5V9 222 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 SMURF1Q9HCE7 757 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 GPRC5CQ9NQ84 441 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 INTS13Q9NVM9 706 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 RAI14Q9P0K7 980 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 IFNKQ9P0W0 207 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 ZC3H7BQ9UGR2 993 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 TSPYL4Q9UJ04 414 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 CBLCQ9ULV8 474 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 TPX2Q9ULW0 747 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms