RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PSMD6Q15008 389 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 SF3A2Q15428 464 aaKnown RBP7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ENOX2Q16206 610 aaKnown RBP7.46□□□□□ -1.22
CLDN4-204ENST00000466411 TPD52L1Q16890 204 aaPredicted RBP7.46□□□□□ -1.22
CLDN4-204ENST00000466411 DUOXA2Q1HG44 320 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 COL28A1Q2UY09 1125 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ZCWPW2Q504Y3 356 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 SLC39A4Q6P5W5 647 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 C15orf39Q6ZRI6 1047 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 NELFCDQ8IXH7 590 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 TTC39CQ8N584 583 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 LRRC52Q8N7C0 313 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 APPL2Q8NEU8 664 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 GPT2Q8TD30 523 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 LPPQ93052 612 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 FAXDC2Q96IV6 333 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 SHDQ96IW2 340 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ZFP42Q96MM3 310 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ARID3AQ99856 593 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 FAM213AQ9BRX8 229 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 APOL6Q9BWW8 343 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 LTB4R2Q9NPC1 389 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.46□□□□□ -1.22
CLDN4-204ENST00000466411 PLSCR2Q9NRY7 297 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 RNF19AQ9NV58 838 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 MAN1B1Q9UKM7 699 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ADAM28Q9UKQ2 775 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 FAN1Q9Y2M0 1017 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 CACNA1EQ15878 2313 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 URB1O60287 2271 aaKnown RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ANKRD63C9JTQ0 380 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SYN3O14994 580 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 TADA2AO75478 443 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 KIF4AO95239 1232 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CXCL14O95715 111 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 POMCP01189 267 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF806P0C7X5 589 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 PLA2G2AP14555 144 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 TNNI1P19237 187 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 IBSPP21815 317 aaPredicted RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 LRPAP1P30533 357 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ATICP31939 592 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 HOXD13P35453 343 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 PBX3P40426 434 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ACOT2P49753 483 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CYP2J2P51589 502 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 OSTNP61366 133 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CLDN10P78369 228 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SPAG1Q07617 926 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CYP24A1Q07973 514 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 KCNA1Q09470 495 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 MTAPQ13126 283 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SLC10A6Q3KNW5 377 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 USP41Q3LFD5 358 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SV2CQ496J9 727 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SPATA1Q5VX52 437 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 RTL10Q7L3V2 364 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 FILIP1Q7Z7B0 1213 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 DDX53Q86TM3 631 aaKnown RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CDR2LQ86X02 465 aaPredicted RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SPNS2Q8IVW8 549 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ZC3H3Q8IXZ2 948 aaKnown RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 COLGALT2Q8IYK4 626 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 FAM186BQ8IYM0 893 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CSGALNACT2Q8N6G5 542 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 NELFBQ8WX92 580 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 TAF4BQ92750 862 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 HPS3Q969F9 1004 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 RNF166Q96A37 237 aaPredicted RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 IGSF21Q96ID5 467 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ZBTB45Q96K62 511 aaPredicted RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 FAM81BQ96LP2 452 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 CBWD1Q9BRT8 395 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 RHOBTB2Q9BYZ6 727 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 SFXN1Q9H9B4 322 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 WDR6Q9NNW5 1121 aaKnown RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 DMAC2Q9NW81 257 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ARMCX3Q9UH62 379 aaPredicted RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 RAB23Q9ULC3 237 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 MAFFQ9ULX9 164 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 HES2Q9Y543 173 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 NUB1Q9Y5A7 615 aa7.45□□□□□ -1.22
CLDN4-204ENST00000466411 ASCC3Q8N3C0 2202 aaKnown RBP7.45□□□□□ -1.22
CLDN4-204ENST00000466411 PIEZO2Q9H5I5 2752 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 FAM221BA6H8Z2 402 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 LACTBL1A8MY62 500 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 H7C4K7 107 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 PTGESO14684 152 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 NRP1O14786 923 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 P4HA2O15460 535 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 STAU1O95793 577 aaKnown RBP7.44□□□□□ -1.22
CLDN4-204ENST00000466411 SOD2P04179 222 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 PRB1P04280 392 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 URODP06132 367 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 GALTP07902 379 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 FAM163BP0C2L3 166 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 CCNYL3P0C7X3 344 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 ODC1P11926 461 aa7.44□□□□□ -1.22
CLDN4-204ENST00000466411 LAMP2P13473 410 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms