RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 COQ4Q9Y3A0 265 aa18.66■□□□□ 0.58
CPSF4-209ENST00000465132 MRPS23Q9Y3D9 190 aaKnown RBP18.66■□□□□ 0.58
CPSF4-209ENST00000465132 KPNA7A9QM74 516 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 CBFA2T2O43439 604 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 ABLIM3O94929 683 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 RHOP08100 348 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 ODC1P11926 461 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 WNT7BP56706 349 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 LILRA4P59901 499 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 ROR1Q01973 937 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 KRT31Q15323 416 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 SLC5A9Q2M3M2 681 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 ZNF699Q32M78 642 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 HSP90AA4PQ58FG1 418 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 ZNF667Q5HYK9 610 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 VARS2Q5ST30 1063 aaKnown RBP18.65■□□□□ 0.58
CPSF4-209ENST00000465132 METTL23Q86XA0 190 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 MAML2Q8IZL2 1156 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-209ENST00000465132 SPATA18Q8TC71 538 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 VRTNQ9H8Y1 702 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 AVENQ9NQS1 362 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-209ENST00000465132 GDE1Q9NZC3 331 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 MTF2Q9Y483 593 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-209ENST00000465132 DAAM1Q9Y4D1 1078 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 PTPRJQ12913 1337 aa18.65■□□□□ 0.58
CPSF4-209ENST00000465132 SYN3O14994 580 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 TBC1D4O60343 1298 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 HUS1O60921 280 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 ECI2O75521 394 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 HLA-DRAP01903 254 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 COPB1P53618 953 aaKnown RBP18.64■□□□□ 0.57
CPSF4-209ENST00000465132 YWHAEP62258 255 aaKnown RBP18.64■□□□□ 0.57
CPSF4-209ENST00000465132 C1orf220Q5T0J3 134 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 ERMP1Q7Z2K6 904 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 TMEM86AQ8N2M4 240 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 MCRS1Q96EZ8 462 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 BCO2Q9BYV7 579 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 OSBPL6Q9BZF3 934 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 GDAP2Q9NXN4 497 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 NOTCH4Q99466 2003 aa18.64■□□□□ 0.57
CPSF4-209ENST00000465132 COL4A3Q01955 1670 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 WDR27A2RRH5 827 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 FAM170BA6NMN3 283 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 PTPN2P17706 415 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 TBXAS1P24557 533 aaPredicted RBP18.63■□□□□ 0.57
CPSF4-209ENST00000465132 ELF1P32519 619 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 UBXN2BQ14CS0 331 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 POTEHQ6S545 545 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 SUSD3Q96L08 255 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 VPS16Q9H269 839 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 SIX4Q9UIU6 781 aa18.63■□□□□ 0.57
CPSF4-209ENST00000465132 H7C4K7 107 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 PRRG1O14668 218 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 ASS1P00966 412 aaKnown RBP18.62■□□□□ 0.57
CPSF4-209ENST00000465132 LRG1P02750 347 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 ATF2P15336 505 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 TYMPP19971 482 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 CD72P21854 359 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 AARSP49588 968 aaKnown RBP eCLIP18.62■□□□□ 0.57
CPSF4-209ENST00000465132 GUCY2FP51841 1108 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 ARPP19P56211 112 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 MYL6P60660 151 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 MRPL58Q14197 206 aaKnown RBP18.62■□□□□ 0.57
CPSF4-209ENST00000465132 WDR72Q3MJ13 1102 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 CBWD6Q4V339 395 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 CBWD3Q5JTY5 395 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 CBWD5Q5RIA9 395 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 TCEAL8Q8IYN2 117 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 THEM5Q8N1Q8 247 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 TOP6BLQ8N6T0 577 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 EHBP1Q8NDI1 1231 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 NT5C1BQ96P26 610 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 PLA2G2FQ9BZM2 168 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 LTB4R2Q9NPC1 389 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 SPATA6Q9NWH7 488 aaPredicted RBP18.62■□□□□ 0.57
CPSF4-209ENST00000465132 GCNT4Q9P109 453 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 FBXL5Q9UKA1 691 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 PCDHB8Q9UN66 801 aa18.62■□□□□ 0.57
CPSF4-209ENST00000465132 EP300Q09472 2414 aaPredicted RBP18.61■□□□□ 0.57
CPSF4-209ENST00000465132 LGALS16A8MUM7 142 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 M0QZQ0 153 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 CYB561D2O14569 222 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 SEC24AO95486 1093 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 CST3P01034 146 aaPredicted RBP18.61■□□□□ 0.57
CPSF4-209ENST00000465132 CEBPBP17676 345 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 MAGEA9P43362 315 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 UBASH3AP57075 661 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 UBXN1Q04323 297 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 ZNF528Q3MIS6 628 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 MIIPQ5JXC2 388 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 PRSS36Q5K4E3 855 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 TANGO2Q6ICL3 276 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 ENOSF1Q7L5Y1 443 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 JAKMIP2Q96AA8 810 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 IQCDQ96DY2 449 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms