RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 FSTL1Q12841 308 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 MGAT5BQ3V5L5 792 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 TOR1AIP2Q8NFQ8 470 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 FBXL20Q96IG2 436 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 KLC4Q9NSK0 619 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 STK32BQ9NY57 414 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 CPNE7Q9UBL6 633 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 PRC1O43663 620 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 KLRC1P26715 233 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 LILRA4P59901 499 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 C11orf96Q7Z7L8 435 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 MICU3Q86XE3 530 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 ACTRT2Q8TDY3 377 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 ACTRT3Q9BYD9 372 aa7.31□□□□□ -1.24
PTCD3-205ENST00000464541 MS4A7Q9GZW8 240 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-205ENST00000464541 WDR27A2RRH5 827 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 MAP4K4O95819 1239 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-205ENST00000464541 HNRNPMP52272 730 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTCD3-205ENST00000464541 E2F2Q14209 437 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 ZNF169Q14929 603 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-205ENST00000464541 KAZNQ674X7 775 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 CCSAPQ6IQ19 270 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-205ENST00000464541 DTX2Q86UW9 622 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 MPP5Q8N3R9 675 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 PDLIM2Q96JY6 352 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 STRBPQ96SI9 672 aaKnown RBP7.3□□□□□ -1.24
PTCD3-205ENST00000464541 XPNPEP3Q9NQH7 507 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 SACM1LQ9NTJ5 587 aa7.3□□□□□ -1.24
PTCD3-205ENST00000464541 ADGRA2Q96PE1 1338 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 TLR5O60602 858 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 SAFBQ15424 915 aaKnown RBP eCLIP7.29□□□□□ -1.24
PTCD3-205ENST00000464541 VPS53Q5VIR6 699 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 ATRIPQ8WXE1 791 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 PHKBQ93100 1093 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 SPSB4Q96A44 273 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 FKBP10Q96AY3 582 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 PBKQ96KB5 322 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 AGAP2Q99490 1192 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 UNKQ9C0B0 810 aaKnown RBP7.29□□□□□ -1.24
PTCD3-205ENST00000464541 EHD3Q9NZN3 535 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 FOXJ2Q9P0K8 574 aa7.29□□□□□ -1.24
PTCD3-205ENST00000464541 NDRG4Q9ULP0 352 aaKnown RBP7.29□□□□□ -1.24
PTCD3-205ENST00000464541 PYCARD-AS1I3L0S3 204 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 CCP110O43303 1012 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 NXPH3O95157 252 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 LMNAP02545 664 aaKnown RBP7.28□□□□□ -1.24
PTCD3-205ENST00000464541 KRT18P05783 430 aaKnown RBP7.28□□□□□ -1.24
PTCD3-205ENST00000464541 ZKSCAN1P17029 563 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-205ENST00000464541 CXCR5P32302 372 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 GRIA3P42263 894 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 DGKEP52429 567 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 TBX4P57082 545 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 COL10A1Q03692 680 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 KRT17Q04695 432 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 TXNRD1Q16881 649 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 INSCQ1MX18 579 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 PLA1AQ53H76 456 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 ZNF618Q5T7W0 954 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 ARHGAP40Q5TG30 622 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 DCAF12L1Q5VU92 463 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 SESTD1Q86VW0 696 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 CCAR1Q8IX12 1150 aaKnown RBP7.28□□□□□ -1.24
PTCD3-205ENST00000464541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTCD3-205ENST00000464541 CAGE1Q8TC20 777 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 ZC3H10Q96K80 434 aaKnown RBP7.28□□□□□ -1.24
PTCD3-205ENST00000464541 PPP1R9BQ96SB3 815 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 COL20A1Q9P218 1284 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 SH2B3Q9UQQ2 575 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 PCDHGB6Q9Y5F9 930 aa7.28□□□□□ -1.24
PTCD3-205ENST00000464541 ANO9A1A5B4 782 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 PQBP1O60828 265 aaKnown RBP7.27□□□□□ -1.25
PTCD3-205ENST00000464541 RARRES1P49788 294 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 MYO1EQ12965 1108 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 COBLL1Q53SF7 1204 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 PRR16Q569H4 304 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 OLFML1Q6UWY5 402 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 TSHZ1Q6ZSZ6 1077 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 PJA1Q8NG27 643 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 OR56A3Q8NH54 315 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 IPCEF1Q8WWN9 437 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-205ENST00000464541 DHX36Q9H2U1 1008 aaKnown RBP7.27□□□□□ -1.25
PTCD3-205ENST00000464541 SSX2IPQ9Y2D8 614 aa7.27□□□□□ -1.25
PTCD3-205ENST00000464541 LOC102723971A0A1B0GUV8 181 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 ADM5C9JUS6 153 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 SLC16A3O15427 465 aaKnown RBP7.26□□□□□ -1.25
PTCD3-205ENST00000464541 INMTO95050 263 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 CHRM2P08172 466 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 RPS16P62249 146 aaKnown RBP7.26□□□□□ -1.25
PTCD3-205ENST00000464541 SIM1P81133 766 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-205ENST00000464541 BMPR2Q13873 1038 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 C3orf38Q5JPI3 329 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 PLAC9Q5JTB6 97 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 RGS7BPQ6MZT1 257 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-205ENST00000464541 GRASPQ7Z6J2 395 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-205ENST00000464541 SLC15A3Q8IY34 581 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 SDR16C5Q8N3Y7 309 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 TFAP2BQ92481 460 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 SALL3Q9BXA9 1300 aa7.26□□□□□ -1.25
PTCD3-205ENST00000464541 RHPN2P1A8MT19 583 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms