RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
XRN1-203ENST00000463916 VITQ6UXI7 678 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 SCARA5Q6ZMJ2 495 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 MYCBPAPQ8TBZ2 947 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 LRRC3BQ96PB8 259 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 TRPV4Q9HBA0 871 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 TMEM30AQ9NV96 361 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 HOOK1Q9UJC3 728 aaKnown RBP13.86□□□□□ -0.19
XRN1-203ENST00000463916 HLA-DRAP01903 254 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 F11P03951 625 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 FAM163BP0C2L3 166 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 PTPN1P18031 435 aaKnown RBP13.85□□□□□ -0.19
XRN1-203ENST00000463916 ANP32AP39687 249 aaKnown RBP13.85□□□□□ -0.19
XRN1-203ENST00000463916 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 SGSM1Q2NKQ1 1148 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 ZNF667Q5HYK9 610 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 ARID3BQ8IVW6 561 aaPredicted RBP13.85□□□□□ -0.19
XRN1-203ENST00000463916 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 PRSS33Q8NF86 280 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 TAS1R2Q8TE23 839 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
XRN1-203ENST00000463916 MMRN2Q9H8L6 949 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 ARHGEF3Q9NR81 526 aa13.85□□□□□ -0.19
XRN1-203ENST00000463916 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
XRN1-203ENST00000463916 MAGED2Q9UNF1 606 aaPredicted RBP13.85□□□□□ -0.19
XRN1-203ENST00000463916 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
XRN1-203ENST00000463916 A8MXQ7 604 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 ASS1P00966 412 aaKnown RBP13.84□□□□□ -0.19
XRN1-203ENST00000463916 CLCN5P51795 746 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 CACNA2D1P54289 1103 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 NLRP12P59046 1061 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 TAF12Q16514 161 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 GPR158Q5T848 1215 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
XRN1-203ENST00000463916 SLC46A2Q9BY10 475 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 GPR88Q9GZN0 384 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 APOBEC3GQ9HC16 384 aaKnown RBP13.84□□□□□ -0.19
XRN1-203ENST00000463916 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 BIN1O00499 593 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 CLDN5O00501 218 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 CETN3O15182 167 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 CLSTN1O94985 981 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 KRT13P13646 458 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 PIK3CAP42336 1068 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 MAGEA11P43364 429 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 ASPAP45381 313 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 RPL10AP62906 217 aaKnown RBP13.84□□□□□ -0.19
XRN1-203ENST00000463916 ORC1Q13415 861 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 SLC44A4Q53GD3 710 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 C4orf50Q6ZRC1 276 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 B3GALNT2Q8NCR0 500 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 B3GNT5Q9BYG0 378 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 SMG9Q9H0W8 520 aaKnown RBP13.84□□□□□ -0.19
XRN1-203ENST00000463916 TBC1D17Q9HA65 648 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 HMGXB4Q9UGU5 601 aa13.84□□□□□ -0.19
XRN1-203ENST00000463916 PTPRDP23468 1912 aa13.83□□□□□ -0.19
XRN1-203ENST00000463916 SHISA7A6NL88 538 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 HEPACAM2A8MVW5 462 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 PPP1R3GB7ZBB8 358 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 STK25O00506 426 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TADA3O75528 432 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 NOL4O94818 638 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 PRAMEF12O95522 483 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 CSH1P0DML2 217 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 CSH2P0DML3 217 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 AOC1P19801 751 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 CD72P21854 359 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 UBE2HP62256 183 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TCF15Q12870 199 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 MORC3Q14149 939 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 SEMA4DQ92854 862 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 MYRFLQ96LU7 910 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TRMT61BQ9BVS5 477 aaKnown RBP13.83□□□□□ -0.2
XRN1-203ENST00000463916 ZNF518BQ9C0D4 1074 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 WDR87Q6ZQQ6 2873 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 FGF19O95750 216 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 PSMC3P17980 439 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 CDC25CP30307 473 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 GRIK1P39086 918 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 USP46P62068 366 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 FKBP3Q00688 224 aaKnown RBP13.83□□□□□ -0.2
XRN1-203ENST00000463916 ENPEPQ07075 957 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 MAPRE1Q15691 268 aaKnown RBP13.83□□□□□ -0.2
XRN1-203ENST00000463916 CAMK4Q16566 473 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TXNDC8Q6A555 127 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 PAQR9Q6ZVX9 377 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 MFSD6LQ8IWD5 586 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 MAB21L3Q8N8X9 362 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TAF4BQ92750 862 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.2
XRN1-203ENST00000463916 FOXQ1Q9C009 403 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TASP1Q9H6P5 420 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 HEBP1Q9NRV9 189 aa13.83□□□□□ -0.2
XRN1-203ENST00000463916 DENND4CQ5VZ89 1909 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 F8VP50 259 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
XRN1-203ENST00000463916 CCNE1P24864 410 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 GDI1P31150 447 aa13.82□□□□□ -0.2
XRN1-203ENST00000463916 STARD6P59095 220 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms