RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 HELLSQ9NRZ9 838 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 SAP30BPQ9UHR5 308 aaKnown RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 ADAMTS5Q9UNA0 930 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 TESMINQ9Y4I5 508 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 RBM8AQ9Y5S9 174 aaKnown RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 MTCH2Q9Y6C9 303 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 MYH2Q9UKX2 1941 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 ROBO3Q96MS0 1386 aa4.21□□□□□ -1.73
SCFD1-204ENST00000463622 FLT1P17948 1338 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 PTPDC1A2A3K4 754 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 CD4P01730 458 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 FGBP02675 491 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 CYP21A2P08686 494 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 CST5P28325 142 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 MSX2P35548 267 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 ANTXR2P58335 489 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 DGCR2P98153 550 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 FOXL1Q12952 345 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 NECTIN1Q15223 517 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 PIK3R6Q5UE93 754 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 PSRC1Q6PGN9 363 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 DDX53Q86TM3 631 aaKnown RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 MB21D1Q8N884 522 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 CALML6Q8TD86 181 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 MAP4K1Q92918 833 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 DYNLL2Q96FJ2 89 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 OR10A2Q9H208 303 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 KCNH6Q9H252 994 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 RPAP3Q9H6T3 665 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 AGO3Q9H9G7 860 aaKnown RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 STARD7Q9NQZ5 370 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 SLC4A4Q9Y6R1 1079 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 PTPRFP10586 1907 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 LTBP2Q14767 1821 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 REV3LO60673 3130 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 NEDD4P46934 1319 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 A0A1W2PRG0 241 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 DUSP11O75319 330 aaKnown RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 SNAI1O95863 264 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 FGAP02671 866 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 SLPIP03973 132 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 ZFYP08048 801 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 FCER1AP12319 257 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 AKR1A1P14550 325 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 PTX3P26022 381 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 APEX1P27695 318 aaKnown RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 IGFALSP35858 605 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 PLCD1P51178 756 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 SLC6A3Q01959 620 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 ALDH6A1Q02252 535 aaKnown RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 NHLH1Q02575 133 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 NFYCQ13952 458 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 CREB3L3Q68CJ9 461 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 IGFL4Q6B9Z1 124 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 MSL3Q8N5Y2 521 aaKnown RBP4.21□□□□□ -1.74
SCFD1-204ENST00000463622 TCEANC2Q96MN5 208 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.21□□□□□ -1.743e-9■■□□□ 13.6
SCFD1-204ENST00000463622 PLA2G3Q9NZ20 509 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 SNX14Q9Y5W7 946 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 LOC285556D6RIA3 1793 aa4.21□□□□□ -1.74
SCFD1-204ENST00000463622 BAZ2AQ9UIF9 1905 aaKnown RBP4.2□□□□□ -1.74
SCFD1-204ENST00000463622 NAV1Q8NEY1 1877 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 FOCADQ5VW36 1801 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 MROH7Q68CQ1 1323 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 NPIPB8E9PQR5 432 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 CTAGE5O15320 804 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 ASMTLO95671 621 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 SLC25A27O95847 323 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 JMJD7P0C870 316 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 MYOGP15173 224 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 SLC9A1P19634 815 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 CYP2C18P33260 490 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 SHMT1P34896 483 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 HSPA4P34932 840 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 RABGGTBP53611 331 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 ATP2C1P98194 919 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-204ENST00000463622 HGFACQ04756 655 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 GABPAQ06546 454 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 ABCB5Q2M3G0 1257 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 CERKLQ49MI3 558 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-204ENST00000463622 KIAA1755Q5JYT7 1200 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 CC2D1AQ6P1N0 951 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-204ENST00000463622 CTR9Q6PD62 1173 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 MAMDC4Q6UXC1 1216 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 RASGRP2Q7LDG7 609 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 CHST14Q8NCH0 376 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 MRFAP1L1Q96HT8 127 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 FEZ1Q99689 392 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 UPF3AQ9H1J1 476 aaKnown RBP4.2□□□□□ -1.74
SCFD1-204ENST00000463622 MTIF3Q9H2K0 278 aaKnown RBP4.2□□□□□ -1.74
SCFD1-204ENST00000463622 SEMA4AQ9H3S1 761 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 SERPINB13Q9UIV8 391 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 RLFQ13129 1914 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 DOCK1Q14185 1865 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 MYO9BQ13459 2157 aa4.2□□□□□ -1.74
SCFD1-204ENST00000463622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 MYADML2A6NDP7 307 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 EPOPA6NHQ4 379 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 LPXNO60711 386 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PRDM1O75626 825 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms