RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 TAF2Q6P1X5 1199 aa13.37□□□□□ -0.27
NUP58-206ENST00000463407 IRF6O14896 467 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 KDM1AO60341 852 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 ITIH2P19823 946 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 PON1P27169 355 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 ARFIP2P53365 341 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 RAD9BQ6WBX8 426 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 CYTH2Q99418 400 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 APOL5Q9BWW9 433 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 MAP2K2P36507 400 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 IKBKEQ14164 716 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 UGP2Q16851 508 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 E4F1Q66K89 784 aaPredicted RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 OOSP2Q86WS3 158 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 TRPM4Q8TD43 1214 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 FAM198AQ9UFP1 575 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 CCDC85CA6NKD9 419 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 ENDOD1O94919 500 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 RGS4P49798 205 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 OXCT1P55809 520 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 FBXO47Q5MNV8 452 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 HIBCHQ6NVY1 386 aaPredicted RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 THG1LQ9NWX6 298 aaKnown RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 NEU2Q9Y3R4 380 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 GMNCA6NCL1 334 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 MTSS1O43312 755 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 HOXC6P09630 235 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 CHRM3P20309 590 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 CSE1LP55060 971 aaKnown RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 TADA3O75528 432 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 HAUS5O94927 633 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 MCF2P10911 925 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 OVOS1Q6IE37 1185 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
NUP58-206ENST00000463407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP58-206ENST00000463407 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
NUP58-206ENST00000463407 MYL6P60660 151 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 AMPD2Q01433 879 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 KRT80Q6KB66 452 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 RIOX2Q8IUF8 465 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■□□ 17.3
NUP58-206ENST00000463407 ADAM33Q9BZ11 813 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 CIPCQ9C0C6 399 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 MOB2Q70IA6 237 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 FAM71DQ8N9W8 422 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ENGASEQ8NFI3 743 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ASPSCR1Q9BZE9 553 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 SMARCAL1Q9NZC9 954 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ADA2Q9NZK5 511 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PMPCBO75439 489 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 FBXO21O94952 628 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ZNF720Q7Z2F6 126 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 USP13Q92995 863 aaPredicted RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 TMEM176AQ96HP8 235 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ANLNQ9NQW6 1124 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 VPS28Q9UK41 221 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 E2F8A0AVK6 867 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 MSCO60682 206 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PYGLP06737 847 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PKN1Q16512 942 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 NAPEPLDQ6IQ20 393 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PIP4K2CQ8TBX8 421 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 ERGIC2Q96RQ1 377 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 TINF2Q9BSI4 451 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PDGFDQ9GZP0 370 aaPredicted RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 TRABDQ9H4I3 376 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 STN1Q9H668 368 aaKnown RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 FBXL21Q9UKT6 434 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 FRMD3A2A2Y4 597 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 STX7O15400 261 aaKnown RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 POLBP06746 335 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
NUP58-206ENST00000463407 NOGQ13253 232 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 BOLA3Q53S33 107 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 NSMCE4AQ9NXX6 385 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 THEGQ9P2T0 379 aa13.35□□□□□ -0.27
NUP58-206ENST00000463407 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.35□□□□□ -0.27
NUP58-206ENST00000463407 CABYRO75952 493 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 RHOCP08134 193 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 AXLP30530 894 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 CYP2W1Q8TAV3 490 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms