RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 FAM71DQ8N9W8 422 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ZNF527Q8NB42 609 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ZSCAN1Q8NBB4 408 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 OR56B2PQ8NGI1 322 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 NPLOC4Q8TAT6 608 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 BTN2A2Q8WVV5 523 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 DHX58Q96C10 678 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 TUBGCP3Q96CW5 907 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 MASTLQ96GX5 879 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 NAP1L3Q99457 506 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 TCF25Q9BQ70 676 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 SMARCAD1Q9H4L7 1026 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 KRT84Q9NSB2 600 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 C5AR2Q9P296 337 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 TEKT2Q9UIF3 430 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 RASAL2Q9UJF2 1139 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 FAM205AQ6ZU69 1335 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 CDK5RAP2Q96SN8 1893 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 RGPD3A6NKT7 1758 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 RGPD4Q7Z3J3 1758 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 CCDC169A6NNP5 214 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 POTECB2RU33 542 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 F5H0A9 414 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ZEB2O60315 1214 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 KDM1AO60341 852 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 RTN3O95197 1032 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 GSNP06396 782 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ZNF3P17036 446 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ENDOUP21128 410 aaKnown RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 MAP2K2P36507 400 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 CASP6P55212 293 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ARL4CP56559 192 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 HTD2P86397 168 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ADIPOQQ15848 244 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ZNF827Q17R98 1081 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 CFAP100Q494V2 611 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 USP39Q53GS9 565 aaKnown RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 FAM47CQ5HY64 1035 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 NT5DC1Q5TFE4 455 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 STYK1Q6J9G0 422 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 NEK5Q6P3R8 708 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 NUDT18Q6ZVK8 323 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 RAB11FIP2Q7L804 512 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 CYP2U1Q7Z449 544 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 AMIGO3Q86WK7 504 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 MICU3Q86XE3 530 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 CCDC13Q8IYE1 715 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 AHI1Q8N157 1196 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 GPR152Q8TDT2 470 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 METTL21AQ8WXB1 218 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 TMIGD2Q96BF3 282 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 PRICKLE1Q96MT3 831 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 TTC12Q9H892 705 aaPredicted RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 SEMA3GQ9NS98 782 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 STK32BQ9NY57 414 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 ACTR3BQ9P1U1 418 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 IMPACTQ9P2X3 320 aa5.68□□□□□ -1.5
TRA2B-207ENST00000463328 SRPRBQ9Y5M8 271 aaKnown RBP5.68□□□□□ -1.5
TRA2B-207ENST00000463328 DDX60LQ5H9U9 1706 aaKnown RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 UFL1O94874 794 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 DLDP09622 509 aaKnown RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 FGFR1P11362 822 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 RHOQP17081 205 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TFE3P19532 575 aaPredicted RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TARSP26639 723 aaKnown RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 NOVP48745 357 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TOB1P50616 345 aaPredicted RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TLR1Q15399 786 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 ZYXQ15942 572 aaKnown RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 ATAT1Q5SQI0 421 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 C12orf60Q5U649 245 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 IZUMO3Q5VZ72 239 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 FCRLBQ6BAA4 426 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 LILRA6Q6PI73 481 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 KLHDC10Q6PID8 442 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 SLC2A7Q6PXP3 512 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 THAP5Q7Z6K1 395 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 LUZP1Q86V48 1076 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 LIX1LQ8IVB5 337 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 DHX40Q8IX18 779 aaKnown RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 GRAMD1CQ8IYS0 662 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 REXO1Q8N1G1 1221 aaKnown RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 EFHBQ8N7U6 833 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 ZBTB8BQ8NAP8 495 aaPredicted RBP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TMEM40Q8WWA1 233 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 RAPGEF5Q92565 580 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 PHKBQ93100 1093 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 MTMR9Q96QG7 549 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 HGH1Q9BTY7 390 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TMEM106CQ9BVX2 250 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 FTOQ9C0B1 505 aaKnown RBP eCLIP5.67□□□□□ -1.5
TRA2B-207ENST00000463328 TRPV6Q9H1D0 765 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 CNTD2Q9H8S5 307 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 CD209Q9NNX6 404 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 RXFP3Q9NSD7 469 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 NMRK1Q9NWW6 199 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 NINJ2Q9NZG7 142 aa5.67□□□□□ -1.5
TRA2B-207ENST00000463328 CPSF3Q9UKF6 684 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms