RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TSPAN17Q96FV3 270 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 TMEM79Q9BSE2 394 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 DGAT1O75907 488 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 KRT36O76013 467 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 NPTXRO95502 500 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 GTF2H1P32780 548 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 CLK1P49759 484 aaKnown RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 FAR2Q96K12 515 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 DNAJC18Q9H819 358 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 PARVBQ9HBI1 364 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 THAP1Q9NVV9 213 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 UTP6Q9NYH9 597 aaKnown RBP16.44■□□□□ 0.22
SMC4-204ENST00000462787 MYRFQ9Y2G1 1151 aa16.44■□□□□ 0.22
SMC4-204ENST00000462787 KANSL1LA0AUZ9 987 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 F8W8V4 182 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 PPARGP37231 505 aaPredicted RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 C21orf59P57076 290 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 TSHZ1Q6ZSZ6 1077 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 ART4Q93070 314 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 LENG1Q96BZ8 264 aaPredicted RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 CLRN2A0PK11 232 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 KLRC4O43908 158 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 ABHD2P08910 425 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 EIF2B2P49770 351 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 SWSAP1Q6NVH7 229 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 SPOCD1Q6ZMY3 1216 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 ATAD3AQ9NVI7 634 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 SYBUQ9NX95 663 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 CPSF3Q9UKF6 684 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 SAC3D1A6NKF1 404 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 RALBP11234 206 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 CRKP46108 304 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 PNMA5Q96PV4 448 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 RIT2Q99578 217 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 GIMAP4Q9NUV9 329 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 GFAPP14136 432 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 VCPP55072 806 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 RPS6P62753 249 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 OTUD4Q01804 1114 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 MRPL28Q13084 256 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 TMEM119Q4V9L6 283 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 FRA10AC1Q70Z53 315 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 KLHL23Q8NBE8 558 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 PSPC1Q8WXF1 523 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 ECSITQ9BQ95 431 aa16.43■□□□□ 0.22
SMC4-204ENST00000462787 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.43■□□□□ 0.22
SMC4-204ENST00000462787 TCRBV5S4A2TA0A5A2 114 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 RRM1P23921 792 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 YY1P25490 414 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 IFNEQ86WN2 208 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 NMRK1Q9NWW6 199 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 RNF225M0QZC1 329 aaPredicted RBP16.42■□□□□ 0.22
SMC4-204ENST00000462787 ADRA1DP25100 572 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 EFNA5P52803 228 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 CLEC16AQ2KHT3 1053 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 ATP8B3O60423 1300 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 XIAPP98170 497 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 NSUN2Q08J23 767 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMC4-204ENST00000462787 ITGA9Q13797 1035 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 PTK2BQ14289 1009 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 SMTNL2Q2TAL5 461 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 SEL1L3Q68CR1 1132 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 METTL23Q86XA0 190 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 PPHLN1Q8NEY8 458 aaKnown RBP16.42■□□□□ 0.22
SMC4-204ENST00000462787 SLC35C1Q96A29 364 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 NYAP2Q9P242 653 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 ARMCX1Q9P291 453 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 KDM6AO15550 1401 aaPredicted RBP16.42■□□□□ 0.22
SMC4-204ENST00000462787 BCL10O95999 233 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 ASNSP08243 561 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 ANPEPP15144 967 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 FDFT1P37268 417 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 ZNF268Q14587 947 aaPredicted RBP16.42■□□□□ 0.22
SMC4-204ENST00000462787 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 FBXO33Q7Z6M2 555 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 HES6Q96HZ4 224 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 NAT9Q9BTE0 207 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 ZNF302Q9NR11 478 aa16.42■□□□□ 0.22
SMC4-204ENST00000462787 NCANO14594 1321 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 C2CD2LO14523 706 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 DLGAP3O95886 979 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 SF3B3Q15393 1217 aaKnown RBP16.41■□□□□ 0.22
SMC4-204ENST00000462787 IMPG1Q17R60 797 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 MICU2Q8IYU8 434 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 OR6Y1Q8NGX8 325 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 DBNDD1Q9H9R9 158 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 A0A087WXM4 84 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 RBAK-RBAKDNI3L0D1 243 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 EPHB6O15197 1021 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 EXTL3O43909 919 aa16.41■□□□□ 0.22
SMC4-204ENST00000462787 WDR47O94967 919 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms