RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 MAGEC2Q9UBF1 373 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-203ENST00000462700 BICDL2A1A5D9 508 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 CSH1P0DML2 217 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 CSH2P0DML3 217 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 HMGA1P17096 107 aaKnown RBP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 PTPN1P18031 435 aaKnown RBP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 FCARP24071 287 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 ASPAP45381 313 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 NOP14P78316 857 aaKnown RBP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 CYP27A1Q02318 531 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 PAK1Q13153 545 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 TAF12Q16514 161 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 DCAF17Q5H9S7 520 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 FAM78AQ5JUQ0 283 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 TCERG1LQ5VWI1 586 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 B3GALNT2Q8NCR0 500 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 STKLD1Q8NE28 680 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 ZSWIM3Q96MP5 696 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 GBP4Q96PP9 640 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 GPR88Q9GZN0 384 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 ATXN3LQ9H3M9 355 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 IL21Q9HBE4 155 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 APOBEC3GQ9HC16 384 aaKnown RBP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 ARMCX3Q9UH62 379 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-203ENST00000462700 TECTAO75443 2155 aa20.1■□□□□ 0.81
COL9A3-203ENST00000462700 ECI2O75521 394 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 BDNFP23560 247 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 CDC25CP30307 473 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 TANGO2Q6ICL3 276 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 VSTM1Q6UX27 236 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 FILIP1Q7Z7B0 1213 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 SCN4BQ8IWT1 228 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 SMARCD2Q92925 531 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 ELSPBP1Q96BH3 223 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 BCO2Q9BYV7 579 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 SLITRK6Q9H5Y7 841 aa20.09■□□□□ 0.81
COL9A3-203ENST00000462700 LRRN2O75325 713 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 NOL4O94818 638 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 PDGFBP01127 241 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-203ENST00000462700 CFHP08603 1231 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 COL9A1P20849 921 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 STX17P56962 302 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 CBWD6Q4V339 395 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 CBWD3Q5JTY5 395 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 CBWD5Q5RIA9 395 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 STXBP5Q5T5C0 1151 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 FRMD5Q7Z6J6 570 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 FBXL6Q8N531 539 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 CCDC150Q8NCX0 1101 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 FBXL13Q8NEE6 735 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 ZSCAN18Q8TBC5 510 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-203ENST00000462700 SEMA4DQ92854 862 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 SLC35C1Q96A29 364 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 TNIP3Q96KP6 325 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 GCNAQ96QF7 691 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 PLA2G2FQ9BZM2 168 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 NIF3L1Q9GZT8 377 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 METTL14Q9HCE5 456 aaKnown RBP20.08■□□□□ 0.81
COL9A3-203ENST00000462700 SLC2A4RGQ9NR83 387 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 RAB20Q9NX57 234 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 FBXL21Q9UKT6 434 aa20.08■□□□□ 0.81
COL9A3-203ENST00000462700 MAGED2Q9UNF1 606 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-203ENST00000462700 SLC38A8A6NNN8 435 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 GRIK1P39086 918 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 NDST1P52848 882 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 CYP4F8P98187 520 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 CCDC40Q4G0X9 1142 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 ARHGAP15Q53QZ3 475 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 UNC93AQ86WB7 457 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 TRMT2BQ96GJ1 504 aaKnown RBP20.07■□□□□ 0.8
COL9A3-203ENST00000462700 B3GNT5Q9BYG0 378 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 ELOVL4Q9GZR5 314 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 NUP62CLQ9H1M0 184 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 CYP3A43Q9HB55 503 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 TRPV4Q9HBA0 871 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 ZFP14Q9HCL3 533 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 WNT16Q9UBV4 365 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 HMGXB4Q9UGU5 601 aa20.07■□□□□ 0.8
COL9A3-203ENST00000462700 TRIM66O15016 1216 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 NLRP12P59046 1061 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 GPC5P78333 572 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 INCA1Q0VD86 236 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 GPR158Q5T848 1215 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 TMEM150AQ86TG1 271 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 ACOT1Q86TX2 421 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 SUGP1Q8IWZ8 645 aaKnown RBP20.06■□□□□ 0.8
COL9A3-203ENST00000462700 SIX5Q8N196 739 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 SPATA17Q96L03 361 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 MYRFLQ96LU7 910 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 CEP295NLQ96MC4 621 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 ZNF518BQ9C0D4 1074 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 UXTQ9UBK9 157 aaPredicted RBP20.06■□□□□ 0.8
COL9A3-203ENST00000462700 COQ4Q9Y3A0 265 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 MYO10Q9HD67 2058 aa20.06■□□□□ 0.8
COL9A3-203ENST00000462700 CLDN5O00501 218 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 F11P03951 625 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 ANXA13P27216 316 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 VIPR2P41587 438 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms